RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SLC10A6Q3KNW5 377 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 SCARA3Q6AZY7 606 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 H2AFVQ71UI9 128 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 SLC47A2Q86VL8 602 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 ZNF710Q8N1W2 664 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 PXYLP1Q8TE99 480 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 TMEM40Q8WWA1 233 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 NOX5Q96PH1 765 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 ALS2CR12Q96Q35 445 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 APOL6Q9BWW8 343 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 EIF2AQ9BY44 585 aaKnown RBP9.28□□□□□ -0.92
TDP1-203ENST00000393454 CELF4Q9BZC1 486 aaKnown RBP9.28□□□□□ -0.92
TDP1-203ENST00000393454 ACP6Q9NPH0 428 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 TSKSQ9UJT2 592 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 PCDHB4Q9Y5E5 795 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 MROH7Q68CQ1 1323 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 ENC1O14682 589 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 INHAP05111 366 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 CTSHP09668 335 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 CYP11B1P15538 503 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 TBXAS1P24557 533 aaPredicted RBP9.28□□□□□ -0.92
TDP1-203ENST00000393454 GRM5P41594 1212 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 NOP2P46087 812 aaKnown RBP9.28□□□□□ -0.92
TDP1-203ENST00000393454 PDE6CP51160 858 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 YARSP54577 528 aaKnown RBP9.28□□□□□ -0.92
TDP1-203ENST00000393454 NKX3-2P78367 333 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 TMEM132DQ14C87 1099 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 ZNF699Q32M78 642 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 MAP3K21Q5TCX8 1036 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 NOP9Q86U38 636 aaKnown RBP9.28□□□□□ -0.92
TDP1-203ENST00000393454 TRIM58Q8NG06 486 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 SLC30A5Q8TAD4 765 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 ASB7Q9H672 318 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 SNTG2Q9NY99 539 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 NOD1Q9Y239 953 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 CDY2AQ9Y6F7 541 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 UMODL1Q5DID0 1318 aa9.28□□□□□ -0.92
TDP1-203ENST00000393454 MYH10P35580 1976 aa9.27□□□□□ -0.92
TDP1-203ENST00000393454 CITO14578 2027 aa9.27□□□□□ -0.92
TDP1-203ENST00000393454 SLU7O95391 586 aaKnown RBP9.27□□□□□ -0.93
TDP1-203ENST00000393454 ASS1P00966 412 aaKnown RBP9.27□□□□□ -0.93
TDP1-203ENST00000393454 CALCAP01258 141 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 CST5P28325 142 aaPredicted RBP9.27□□□□□ -0.93
TDP1-203ENST00000393454 AXLP30530 894 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 GALCP54803 685 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 POU5F1Q01860 360 aaKnown RBP9.27□□□□□ -0.93
TDP1-203ENST00000393454 PTGISQ16647 500 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 TMEM270Q6UE05 265 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 RNF10Q8N5U6 811 aaKnown RBP9.27□□□□□ -0.93
TDP1-203ENST00000393454 SLAIN1Q8ND83 568 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 KIF12Q96FN5 646 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 SYT11Q9BT88 431 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 PDCL3Q9H2J4 239 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 L2HGDHQ9H9P8 463 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 HMX1Q9NP08 348 aaPredicted RBP9.27□□□□□ -0.93
TDP1-203ENST00000393454 SALL4Q9UJQ4 1053 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 NOCTQ9UK39 431 aaKnown RBP9.27□□□□□ -0.93
TDP1-203ENST00000393454 NOC2LQ9Y3T9 749 aaKnown RBP9.27□□□□□ -0.93
TDP1-203ENST00000393454 HES2Q9Y543 173 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 TRIM17Q9Y577 477 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 TRPV2Q9Y5S1 764 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 CAPN6Q9Y6Q1 641 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 PCNTO95613 3336 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 MEFVO15553 781 aaPredicted RBP9.27□□□□□ -0.93
TDP1-203ENST00000393454 ITGB3P05106 788 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 MMEP08473 750 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 CHRNB2P17787 502 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 CD58P19256 250 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 ABCB4P21439 1286 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 GRK4P32298 578 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 THPOP40225 353 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 ACLYP53396 1101 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 BPIFB4P59827 614 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 ITGA7Q13683 1181 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 CCSAPQ6IQ19 270 aaPredicted RBP9.27□□□□□ -0.93
TDP1-203ENST00000393454 SCARA5Q6ZMJ2 495 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 SERINC5Q86VE9 423 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 PALB2Q86YC2 1186 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 TMEM130Q8N3G9 435 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 C1orf127Q8N9H9 656 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 EPS8L1Q8TE68 723 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 BEGAINQ9BUH8 593 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 NIF3L1Q9GZT8 377 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 SAGE1Q9NXZ1 904 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 TAS2R14Q9NYV8 317 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 NXF1Q9UBU9 619 aaKnown RBP9.27□□□□□ -0.93
TDP1-203ENST00000393454 PARP2Q9UGN5 583 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 PUF60Q9UHX1 559 aaKnown RBP9.27□□□□□ -0.93
TDP1-203ENST00000393454 NENFQ9UMX5 172 aa9.27□□□□□ -0.93
TDP1-203ENST00000393454 RPS6KA5O75582 802 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 CABYRO75952 493 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 ATP1A1P05023 1023 aaKnown RBP9.26□□□□□ -0.93
TDP1-203ENST00000393454 WEE2P0C1S8 567 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 AKAP5P24588 427 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 POLR2BP30876 1174 aaKnown RBP9.26□□□□□ -0.93
TDP1-203ENST00000393454 GUCY2FP51841 1108 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 PRMT2P55345 433 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 CDR2Q01850 454 aa9.26□□□□□ -0.93
TDP1-203ENST00000393454 NFX1Q12986 1120 aaKnown RBP9.26□□□□□ -0.93
TDP1-203ENST00000393454 IFI16Q16666 785 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms