RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 PON2Q15165 354 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PTGISQ16647 500 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 CA9Q16790 459 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 RGS21Q2M5E4 152 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 USP39Q53GS9 565 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 REXO1L1PQ8IX06 675 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 UBE2J2Q8N2K1 259 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 WDR36Q8NI36 951 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 RNFT2Q96EX2 444 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 HES6Q96HZ4 224 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 MS4A14Q96JA4 679 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 RNPC3Q96LT9 517 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 ASPNQ9BXN1 380 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SLC6A15Q9H2J7 730 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 VTA1Q9NP79 307 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PAG1Q9NWQ8 432 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 BABAM1Q9NWV8 329 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PFDN2Q9UHV9 154 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.43□□□□□ -1.86
PHF3-202ENST00000393387 CLEC4AQ9UMR7 237 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 NSFL1CQ9UNZ2 370 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 DOLKQ9UPQ8 538 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 KDM2BQ8NHM5 1336 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 DISP3Q9P2K9 1392 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 ARHGEF37A1IGU5 675 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 ZSCAN5BA6NJL1 495 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PHGDHO43175 533 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 OR7A10O76100 309 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 EPN2O95208 641 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 ZBTB11O95625 1053 aaPredicted RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 ZNF3P17036 446 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 GJA1P17302 382 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 TFE3P19532 575 aaPredicted RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 CCNA2P20248 432 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 RFX1P22670 979 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SP100P23497 879 aaPredicted RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 MFAP3P55082 362 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 CDC16Q13042 620 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 TRAF3Q13114 568 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 DGCR6Q14129 220 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 CALCRLQ16602 461 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 DPCR1Q3MIW9 517 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SPDYAQ5MJ70 313 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 ABRAXAS1Q6UWZ7 409 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SLC13A5Q86YT5 568 aaPredicted RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 LENG1Q96BZ8 264 aaPredicted RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 CSRNP1Q96S65 589 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PTPRHQ9HD43 1115 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 ZNF277Q9NRM2 450 aaPredicted RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 IL1RAPL1Q9NZN1 696 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 BLOC1S6Q9UL45 172 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 NOC2LQ9Y3T9 749 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 C5orf58C9J3I9 102 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SMAD9O15198 467 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 MAP3K13O43283 966 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 B3GALNT1O75752 331 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 APOL3O95236 402 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 RALBP11234 206 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PTPN1P18031 435 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 CASP1P29466 404 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 CDC25BP30305 580 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 RFX3P48380 749 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PGDP52209 483 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 VSNL1P62760 191 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 GFPT1Q06210 699 aaPredicted RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 NME3Q13232 169 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 EML3Q32P44 896 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 C5orf22Q49AR2 442 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SGO1Q5FBB7 561 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 DPP8Q6V1X1 898 aaPredicted RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 MSANTD1Q6ZTZ1 278 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 EPHX4Q8IUS5 362 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 AGGF1Q8N302 714 aaeCLIP3.43□□□□□ -1.866e-8■■■■■ 28.7
PHF3-202ENST00000393387 ZBTB8BQ8NAP8 495 aaPredicted RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 EXD1Q8NHP7 514 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 GDPD5Q8WTR4 605 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SCFD2Q8WU76 684 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 ELMO1Q92556 727 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 RMDN1Q96DB5 314 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 NLRP3Q96P20 1036 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 FAM118BQ9BPY3 351 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 SENP7Q9BQF6 1050 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PHACTR1Q9C0D0 580 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 KLHL4Q9C0H6 718 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 EPB41L1Q9H4G0 881 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 FAM96AQ9H5X1 160 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 KIAA1586Q9HCI6 787 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 MCM9Q9NXL9 1143 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PCDH10Q9P2E7 1040 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 MAD2L2Q9UI95 211 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 GNAT3A8MTJ3 354 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 KPNA7A9QM74 516 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 ACADSP16219 412 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PRKACAP17612 351 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 CD58P19256 250 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 MAGEA12P43365 314 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 PPP3CCP48454 512 aa3.43□□□□□ -1.86
PHF3-202ENST00000393387 EIF3BP55884 814 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 KNOP1Q1ED39 458 aaKnown RBP3.43□□□□□ -1.86
PHF3-202ENST00000393387 DCAF4L1Q3SXM0 396 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms