RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 DDHD2O94830 711 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 CYP11A1P05108 521 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 NFICP08651 508 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 C9orf57Q5W0N0 161 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 C1orf127Q8N9H9 656 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 COLGALT1Q8NBJ5 622 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 ANKRD36BP1Q96IX9 119 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 PDE11AQ9HCR9 933 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 PARP2Q9UGN5 583 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 PLAGL2Q9UPG8 496 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 GOLGA8IPA6NC78 632 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 GOLGA8JA6NMD2 632 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 VNN1O95497 513 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 POU3F3P20264 500 aaPredicted RBP14.34□□□□□ -0.11
USP44-202ENST00000393091 SOX4Q06945 474 aaPredicted RBP14.34□□□□□ -0.11
USP44-202ENST00000393091 SLC39A11Q8N1S5 342 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 AOPEPQ8N6M6 819 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 RPS6KC1Q96S38 1066 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 SAMSN1Q9NSI8 373 aaKnown RBP14.34□□□□□ -0.11
USP44-202ENST00000393091 MRPL42Q9Y6G3 142 aaKnown RBP14.34□□□□□ -0.11
USP44-202ENST00000393091 A0A1B0GTH6 734 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 PPM1AP35813 382 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 SCNN1GP51170 649 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 STX17P56962 302 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 DLG4P78352 724 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 PPP3CAQ08209 521 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 VWA3BQ502W6 1294 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 KRT39Q6A163 491 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 FAM81BQ96LP2 452 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 ZFP42Q96MM3 310 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 LMAN2LQ9H0V9 348 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 XYLT2Q9H1B5 865 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 DPP3Q9NY33 737 aa14.34□□□□□ -0.11
USP44-202ENST00000393091 FSCN2O14926 492 aa14.33□□□□□ -0.12
USP44-202ENST00000393091 B4GALT3O60512 393 aa14.33□□□□□ -0.12
USP44-202ENST00000393091 AFPP02771 609 aaKnown RBP14.33□□□□□ -0.12
USP44-202ENST00000393091 GALTP07902 379 aa14.33□□□□□ -0.12
USP44-202ENST00000393091 FMO5P49326 533 aa14.33□□□□□ -0.12
USP44-202ENST00000393091 TDRD10Q5VZ19 366 aaKnown RBP14.33□□□□□ -0.12
USP44-202ENST00000393091 CEP135Q66GS9 1140 aa14.33□□□□□ -0.12
USP44-202ENST00000393091 DPH6Q7L8W6 267 aa14.33□□□□□ -0.12
USP44-202ENST00000393091 KIF12Q96FN5 646 aa14.33□□□□□ -0.12
USP44-202ENST00000393091 HERC2P3Q9BVR0 1158 aa14.33□□□□□ -0.12
USP44-202ENST00000393091 AAASQ9NRG9 546 aa14.33□□□□□ -0.12
USP44-202ENST00000393091 MARCH5Q9NX47 278 aa14.33□□□□□ -0.12
USP44-202ENST00000393091 MTCL1Q9Y4B5 1905 aaKnown RBP14.33□□□□□ -0.12
USP44-202ENST00000393091 LINC01553A4QN01 128 aa14.33□□□□□ -0.12
USP44-202ENST00000393091 AFF1P51825 1210 aaKnown RBP14.33□□□□□ -0.12
USP44-202ENST00000393091 TRAPPC11Q7Z392 1133 aa14.33□□□□□ -0.12
USP44-202ENST00000393091 ERGIC2Q96RQ1 377 aa14.33□□□□□ -0.12
USP44-202ENST00000393091 A0A1W2PQC6 194 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 TBKBP1A7MCY6 615 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 TNNC2P02585 160 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 PBX1P40424 430 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 RBP5P82980 135 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 KRT31Q15323 416 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 SEZ6Q53EL9 994 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 PDE12Q6L8Q7 609 aaKnown RBP14.32□□□□□ -0.12
USP44-202ENST00000393091 DDX53Q86TM3 631 aaKnown RBP14.32□□□□□ -0.12
USP44-202ENST00000393091 FIBCD1Q8N539 461 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 UBR7Q8N806 425 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 OR5B17Q8NGF7 314 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 FNBP1Q96RU3 617 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 TUBGCP2Q9BSJ2 902 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 PLCB1Q9NQ66 1216 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 LGALS16A8MUM7 142 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 RFX1P22670 979 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 TPM4P67936 248 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 MRPL58Q14197 206 aaKnown RBP14.32□□□□□ -0.12
USP44-202ENST00000393091 SV2AQ7L0J3 742 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 ZNF280BQ86YH2 543 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 ABI1Q8IZP0 508 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 SUSD3Q96L08 255 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 ZNF560Q96MR9 790 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 BCO2Q9BYV7 579 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 RTN4Q9NQC3 1192 aaKnown RBP14.32□□□□□ -0.12
USP44-202ENST00000393091 MKI67P46013 3256 aaKnown RBP14.32□□□□□ -0.12
USP44-202ENST00000393091 ASS1P00966 412 aaKnown RBP14.32□□□□□ -0.12
USP44-202ENST00000393091 TYMPP19971 482 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 BCAR1P56945 870 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 KCNH2Q12809 1159 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 IQCDQ96DY2 449 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 COLEC11Q9BWP8 271 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 PBX4Q9BYU1 374 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 LMCD1Q9NZU5 365 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 MAGEC2Q9UBF1 373 aaPredicted RBP14.32□□□□□ -0.12
USP44-202ENST00000393091 TUBGCP4Q9UGJ1 667 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 CNTN6Q9UQ52 1028 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 YBX2Q9Y2T7 364 aaKnown RBP14.32□□□□□ -0.12
USP44-202ENST00000393091 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.32□□□□□ -0.12
USP44-202ENST00000393091 IRAK3Q9Y616 596 aa14.32□□□□□ -0.12
USP44-202ENST00000393091 FSD2A1L4K1 749 aa14.31□□□□□ -0.12
USP44-202ENST00000393091 TLL1O43897 1013 aa14.31□□□□□ -0.12
USP44-202ENST00000393091 TACC1O75410 805 aa14.31□□□□□ -0.12
USP44-202ENST00000393091 BMPR1AP36894 532 aa14.31□□□□□ -0.12
USP44-202ENST00000393091 ELAVL2Q12926 359 aaKnown RBP14.31□□□□□ -0.12
USP44-202ENST00000393091 NR1I3Q14994 352 aa14.31□□□□□ -0.12
USP44-202ENST00000393091 PDXDC1Q6P996 788 aa14.31□□□□□ -0.12
USP44-202ENST00000393091 NDST4Q9H3R1 872 aa14.31□□□□□ -0.12
USP44-202ENST00000393091 MAFFQ9ULX9 164 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms