RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 RPS3AP61247 264 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 EIF4A2Q14240 407 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 KHDC1Q4VXA5 237 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 WDR44Q5JSH3 913 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 RINT1Q6NUQ1 792 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 TMC3Q7Z5M5 1100 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 LRRC43Q8N309 656 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 CELF5Q8N6W0 485 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.85□□□□□ -1.799e-12■■■■□ 21.2
XRN1-202ENST00000392981 KREMEN1Q96MU8 473 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 P2RX7Q99572 595 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 DDX23Q9BUQ8 820 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 CNOT7Q9UIV1 285 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 KCNH3Q9ULD8 1083 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 FHOD1Q9Y613 1164 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 EIF3CLB5ME19 914 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 F8W8V4 182 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 GFRA2O00451 464 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 ARHGAP6O43182 974 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 DDX58O95786 925 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 GSNP06396 782 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 THP07101 528 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 RPL10P27635 214 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 GPC1P35052 558 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 ETV3P41162 512 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 DMTNQ08495 405 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 ANKDD1AQ495B1 522 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 ZNF805Q5CZA5 627 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 RTL10Q7L3V2 364 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 RFWD2Q8NHY2 731 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 GPR27Q9NS67 375 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 SUSD2Q9UGT4 822 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 XPO7Q9UIA9 1087 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 ADAM30Q9UKF2 790 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 A0A087X0M5 115 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 A0A0U1RQK1 487 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 A0A1B0GX30 115 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 UBA6A0AVT1 1052 aaPredicted RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 ZNF320A2RRD8 509 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 NDC80O14777 642 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 LRRN2O75325 713 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 EOMESO95936 686 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 PCP11498 1178 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 FGFR2P21802 821 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 ALAS2P22557 587 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 CARSP49589 748 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 GALK1P51570 392 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 GPLD1P80108 840 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 GALK2Q01415 458 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 FMO1Q01740 532 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 SATB1Q01826 763 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 TAZQ16635 292 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 NBPF8Q3BBV2 869 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 FBXO47Q5MNV8 452 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 PLA2G2CQ5R387 149 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 KIAA1614Q5VZ46 1190 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 NYAP1Q6ZVC0 841 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 ZNF804AQ7Z570 1209 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 VN1R5Q7Z5H4 357 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 GPR149Q86SP6 731 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 MCATQ8IVS2 390 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 TUSC5Q8IXB3 177 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 ARHGEF39Q8N4T4 335 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 NGEFQ8N5V2 710 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 C3orf20Q8ND61 904 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 LIMA1Q9UHB6 759 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 TMEFF2Q9UIK5 374 aaPredicted RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 DSEQ9UL01 958 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 BLOC1S6Q9UL45 172 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 C17orf113A0A1B0GUU1 675 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 VILLO15195 856 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 GJB3O75712 270 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 BMP4P12644 408 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 GRNP28799 593 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 THPOP40225 353 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 ATP8B2P98198 1209 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 EXOSC9Q06265 439 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 STK4Q13043 487 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 TUSC3Q13454 348 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 FAM110CQ1W6H9 321 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 ZNF569Q5MCW4 686 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 POTEEQ6S8J3 1075 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 THSD4Q6ZMP0 1018 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 SYT9Q86SS6 491 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 DZIP1LQ8IYY4 767 aaKnown RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 FRS2Q8WU20 508 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 HMGB4Q8WW32 186 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 ASIC4Q96FT7 647 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 CYP4F11Q9HBI6 524 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 HEYLQ9NQ87 328 aaPredicted RBP3.85□□□□□ -1.79
XRN1-202ENST00000392981 ADPRHL2Q9NX46 363 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 DCAF16Q9NXF7 216 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 WDR35Q9P2L0 1181 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 TBX20Q9UMR3 447 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 PHF24Q9UPV7 400 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 AURKCQ9UQB9 309 aa3.85□□□□□ -1.79
XRN1-202ENST00000392981 TRAV34A0A0B4J273 112 aa3.84□□□□□ -1.79
XRN1-202ENST00000392981 PRAMEF22A3QJZ6 481 aa3.84□□□□□ -1.79
XRN1-202ENST00000392981 H3BQ06 376 aaPredicted RBP3.84□□□□□ -1.79
XRN1-202ENST00000392981 STX16-NPEPL1H3BU86 382 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms