RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 CPP00450 1065 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 HNRNPA1P09651 372 aaKnown RBP eCLIP0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 CLEC2LP0C7M8 214 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 GUCY2CP25092 1073 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 GNA15P30679 374 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 KCNJ6P48051 423 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 PGGT1BP53609 377 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 DSCR9P59020 149 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 SLC7A5Q01650 507 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 DSC2Q02487 901 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 GHRHRQ02643 423 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 POU3F1Q03052 451 aaPredicted RBP0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 ZNF268Q14587 947 aaPredicted RBP0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 ANKS6Q68DC2 871 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 FSTL4Q6MZW2 842 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 SPSB3Q6PJ21 355 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 FOXR2Q6PJQ5 311 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 IGFL3Q6UXB1 125 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 Q6ZVH6 145 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 RTL10Q7L3V2 364 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 FANCBQ8NB91 859 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 OR5AN1Q8NGI8 311 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 DYDC2Q96IM9 177 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 PGBD1Q96JS3 809 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 UIMC1Q96RL1 719 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 UBXN6Q9BZV1 441 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 REXO4Q9GZR2 422 aaKnown RBP0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 SCAF8Q9UPN6 1271 aaKnown RBP0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 SUPT16HQ9Y5B9 1047 aaKnown RBP0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 AK5Q9Y6K8 562 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 MUC16Q8WXI7 14507 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 SCN5AQ14524 2016 aa0.18□□□□□ -2.38
RNU6-540P-201ENST00000384622 NOTCH1P46531 2555 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 ANKRD34BA5PLL1 514 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 SMTNL1A8MU46 457 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 DSCR3O14972 297 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 PROM1O43490 865 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 ZNF500O60304 480 aaPredicted RBP0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 C4BPAP04003 597 aaKnown RBP0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 SCG5P05408 212 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 MMEP08473 750 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 EBLN1P0CF75 366 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 SRGNP10124 158 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 FGFR4P22455 802 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 DLX5P56178 289 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 HSD11B2P80365 405 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 KRT72Q14CN4 511 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 SLC29A4Q7RTT9 530 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 MAPK1IP1LQ8NDC0 245 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 ZFP28Q8NHY6 868 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 PPP1R14AQ96A00 147 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 ZNF347Q96SE7 839 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 RSRP1Q9BUV0 290 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 MANSC1Q9H8J5 431 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 POLR3BQ9NW08 1133 aaPredicted RBP0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 PI4KBQ9UBF8 816 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 TP53TG3Q9ULZ0 132 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 PCDHB10Q9UN67 800 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 SRPK3Q9UPE1 567 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 NPFFR2Q9Y5X5 522 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 MDN1Q9NU22 5596 aa0.17□□□□□ -2.38
RNU6-540P-201ENST00000384622 TCRBV5S4A2TA0A5A2 114 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 B5MCH6 92 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 GREM1O60565 184 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 MSCO60682 206 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 ARRB2P32121 409 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 DLK1P80370 383 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 ZNF91Q05481 1191 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 GEN1Q17RS7 908 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 DENND5AQ6IQ26 1287 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 USP17L6PQ6QN14 398 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 PRSS57Q6UWY2 283 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 SUGP2Q8IX01 1082 aaKnown RBP eCLIP0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 BTN2A2Q8WVV5 523 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 ASB15Q8WXK1 588 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 SSH1Q8WYL5 1049 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 EXOC2Q96KP1 924 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 MRGPRX3Q96LB0 322 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 NLRP4Q96MN2 994 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 APBA2Q99767 749 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 TRMT61BQ9BVS5 477 aaKnown RBP0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 PELI2Q9HAT8 420 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 AATKQ6ZMQ8 1374 aa0.16□□□□□ -2.38
RNU6-540P-201ENST00000384622 IGLV5-39A0A0G2JS06 123 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 TRAFD1O14545 582 aaPredicted RBP0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 KRT36O76013 467 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 ALDH1A2O94788 518 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 ACAA1P09110 424 aaPredicted RBP0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 FAM163BP0C2L3 166 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 ART1P52961 327 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 APOBRQ0VD83 1088 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 SLC39A5Q6ZMH5 540 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 RUFY4Q6ZNE9 571 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 ARHGAP36Q6ZRI8 547 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 MED25Q71SY5 747 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 MMP21Q8N119 569 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 PBXIP1Q96AQ6 731 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 CCDC140Q96MF4 163 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 LINC00167Q96N53 147 aa0.15□□□□□ -2.39
RNU6-540P-201ENST00000384622 GBP4Q96PP9 640 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms