RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 A0A1W2PPM1 405 aa15.9■□□□□ 0.14
CTNS-202ENST00000381870 HP1BP3Q5SSJ5 553 aaPredicted RBP15.9■□□□□ 0.14
CTNS-202ENST00000381870 FYB2Q5VWT5 728 aa15.9■□□□□ 0.14
CTNS-202ENST00000381870 LVRNQ6Q4G3 990 aa15.9■□□□□ 0.14
CTNS-202ENST00000381870 ZNF513Q8N8E2 541 aaPredicted RBP15.9■□□□□ 0.14
CTNS-202ENST00000381870 ZNF564Q8TBZ8 553 aaPredicted RBP15.9■□□□□ 0.14
CTNS-202ENST00000381870 NSL1Q96IY1 281 aa15.9■□□□□ 0.14
CTNS-202ENST00000381870 SMC6Q96SB8 1091 aa15.9■□□□□ 0.14
CTNS-202ENST00000381870 CENPKQ9BS16 269 aa15.9■□□□□ 0.14
CTNS-202ENST00000381870 NUP85Q9BW27 656 aa15.9■□□□□ 0.14
CTNS-202ENST00000381870 FBXO6Q9NRD1 293 aaPredicted RBP15.9■□□□□ 0.14
CTNS-202ENST00000381870 LARSQ9P2J5 1176 aaKnown RBP15.9■□□□□ 0.14
CTNS-202ENST00000381870 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.9■□□□□ 0.14
CTNS-202ENST00000381870 MYO3BQ8WXR4 1341 aa15.9■□□□□ 0.14
CTNS-202ENST00000381870 HNRNPRO43390 633 aaKnown RBP15.89■□□□□ 0.13
CTNS-202ENST00000381870 PPP1R11O60927 126 aaPredicted RBP15.89■□□□□ 0.13
CTNS-202ENST00000381870 RNASEH1O60930 286 aaKnown RBP15.89■□□□□ 0.13
CTNS-202ENST00000381870 FAM200BP0CF97 657 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 SMARCA1P28370 1054 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 CETN2P41208 172 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 PIK3CAP42336 1068 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 BMT2Q1RMZ1 405 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 CAPN12Q6ZSI9 719 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 RHBDL2Q9NX52 303 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 STK32BQ9NY57 414 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 R3HDM2Q9Y2K5 976 aaKnown RBP15.89■□□□□ 0.13
CTNS-202ENST00000381870 C10orf71Q711Q0 1435 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 SNED1Q8TER0 1413 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 MAGEA4P43358 317 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 CLK2P49760 499 aaKnown RBP15.89■□□□□ 0.13
CTNS-202ENST00000381870 TCEAL1Q15170 157 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 DAB2IPQ5VWQ8 1189 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 TMEM165Q9HC07 324 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 GPCPD1Q9NPB8 672 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 ACP6Q9NPH0 428 aa15.89■□□□□ 0.13
CTNS-202ENST00000381870 AHDC1Q5TGY3 1603 aaPredicted RBP15.88■□□□□ 0.13
CTNS-202ENST00000381870 CDK8P49336 464 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 BPIFB4P59827 614 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 MYL7Q01449 175 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 CAV1Q03135 178 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 DEUP1Q05D60 604 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 ACBD5Q5T8D3 534 aaPredicted RBP15.88■□□□□ 0.13
CTNS-202ENST00000381870 ZNF365Q70YC5 407 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 RIBC1Q8N443 379 aaPredicted RBP15.88■□□□□ 0.13
CTNS-202ENST00000381870 SYT2Q8N9I0 419 aaPredicted RBP15.88■□□□□ 0.13
CTNS-202ENST00000381870 SLC5A5Q92911 643 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 HIC2Q96JB3 615 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 RBM15Q96T37 977 aaKnown RBP eCLIP15.88■□□□□ 0.13
CTNS-202ENST00000381870 ECSITQ9BQ95 431 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 C12orf65Q9H3J6 166 aaKnown RBP15.88■□□□□ 0.13
CTNS-202ENST00000381870 LRRC4BQ9NT99 713 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 ANKFY1Q9P2R3 1169 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 SMG5Q9UPR3 1016 aaKnown RBP15.88■□□□□ 0.13
CTNS-202ENST00000381870 PCDHGA4Q9Y5G9 962 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.88■□□□□ 0.13
CTNS-202ENST00000381870 C2orf71A6NGG8 1288 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 hCG_1984214I3L0E3 225 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 ZBED4O75132 1171 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 SERPINB3P29508 390 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 NMT1P30419 496 aaKnown RBP15.88■□□□□ 0.13
CTNS-202ENST00000381870 HIBADHP31937 336 aaKnown RBP15.88■□□□□ 0.13
CTNS-202ENST00000381870 CYP2J2P51589 502 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 DSG1Q02413 1049 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 IZUMO3Q5VZ72 239 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 MARK2Q7KZI7 788 aaKnown RBP15.88■□□□□ 0.13
CTNS-202ENST00000381870 ZNF804AQ7Z570 1209 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 ZNF713Q8N859 430 aaPredicted RBP15.88■□□□□ 0.13
CTNS-202ENST00000381870 NGLY1Q96IV0 654 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 UBE2TQ9NPD8 197 aaPredicted RBP15.88■□□□□ 0.13
CTNS-202ENST00000381870 BLOC1S6Q9UL45 172 aa15.88■□□□□ 0.13
CTNS-202ENST00000381870 COL16A1Q07092 1604 aaPredicted RBP15.88■□□□□ 0.13
CTNS-202ENST00000381870 TYROBPO43914 113 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 GAS8O95995 478 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 TROVE2P10155 538 aaKnown RBP eCLIP15.87■□□□□ 0.13
CTNS-202ENST00000381870 ANPEPP15144 967 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 CPA2P48052 419 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 NR1H3Q13133 447 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 CFAP157Q5JU67 520 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 ARHGEF19Q8IW93 802 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 NEDD1Q8NHV4 660 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 MORC4Q8TE76 937 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 NAT14Q8WUY8 206 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 CELF1Q92879 486 aaKnown RBP15.87■□□□□ 0.13
CTNS-202ENST00000381870 FAM163AQ96GL9 167 aaPredicted RBP15.87■□□□□ 0.13
CTNS-202ENST00000381870 FNBP1Q96RU3 617 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 MAK16Q9BXY0 300 aaKnown RBP15.87■□□□□ 0.13
CTNS-202ENST00000381870 DCLK3Q9C098 648 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.87■□□□□ 0.133e-13■■■■■ 511.3
CTNS-202ENST00000381870 PICK1Q9NRD5 415 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 HSFX1Q9UBD0 423 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 DNM3Q9UQ16 869 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 TBC1D30Q9Y2I9 924 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 ATP6V1G1O75348 118 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 MTA2O94776 668 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 USP1O94782 785 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 SGPL1O95470 568 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 SPATA31C1P0DKV0 1188 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 SETSIPP0DME0 302 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 ADRA1DP25100 572 aa15.87■□□□□ 0.13
CTNS-202ENST00000381870 PGM1P36871 562 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms