RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TCF25Q9BQ70 676 aa17.55■□□□□ 0.4
SNRPB-201ENST00000381342 SLC38A7Q9NVC3 462 aa17.55■□□□□ 0.4
SNRPB-201ENST00000381342 UNC80Q8N2C7 3258 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 GRXCR2A6NFK2 248 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 CALUO43852 315 aaPredicted RBP17.54■□□□□ 0.4
SNRPB-201ENST00000381342 KIF4AO95239 1232 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 IL18RAPO95256 599 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 ALDH2P05091 517 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 SSTR3P32745 418 aaPredicted RBP17.54■□□□□ 0.4
SNRPB-201ENST00000381342 GUCY2FP51841 1108 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 ERVFC1P60507 584 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 HSP90AA2PQ14568 343 aaPredicted RBP17.54■□□□□ 0.4
SNRPB-201ENST00000381342 TMEM132DQ14C87 1099 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 SNRNP35Q16560 246 aaKnown RBP17.54■□□□□ 0.4
SNRPB-201ENST00000381342 CTC1Q2NKJ3 1217 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 ZCWPW2Q504Y3 356 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 EFCAB13Q8IY85 973 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 ADSSL1Q8N142 457 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 XXYLT1Q8NBI6 393 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 RDH13Q8NBN7 331 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 FAM84AQ96KN4 292 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 FBXL18Q96ME1 805 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 VN1R3Q9BXE9 311 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 GTPBP4Q9BZE4 634 aaKnown RBP17.54■□□□□ 0.4
SNRPB-201ENST00000381342 STK39Q9UEW8 545 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 CD207Q9UJ71 328 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 TRAF3IP3Q9Y228 551 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 VWA8A3KMH1 1905 aa17.54■□□□□ 0.4
SNRPB-201ENST00000381342 PRUNE2Q8WUY3 3088 aa17.53■□□□□ 0.4
SNRPB-201ENST00000381342 EXOC3O60645 756 aa17.53■□□□□ 0.4
SNRPB-201ENST00000381342 GTF2F1P35269 517 aaKnown RBP eCLIP17.53■□□□□ 0.41e-6■□□□□ 8.3
SNRPB-201ENST00000381342 CLCNKBP51801 687 aa17.53■□□□□ 0.4
SNRPB-201ENST00000381342 STIM1Q13586 685 aa17.53■□□□□ 0.4
SNRPB-201ENST00000381342 SMC1AQ14683 1233 aaKnown RBP17.53■□□□□ 0.4
SNRPB-201ENST00000381342 COL19A1Q14993 1142 aa17.53■□□□□ 0.4
SNRPB-201ENST00000381342 CLUL1Q15846 466 aa17.53■□□□□ 0.4
SNRPB-201ENST00000381342 CD302Q8IX05 232 aa17.53■□□□□ 0.4
SNRPB-201ENST00000381342 ASB7Q9H672 318 aa17.53■□□□□ 0.4
SNRPB-201ENST00000381342 PDE11AQ9HCR9 933 aa17.53■□□□□ 0.4
SNRPB-201ENST00000381342 DMAC2Q9NW81 257 aa17.53■□□□□ 0.4
SNRPB-201ENST00000381342 UBQLN1Q9UMX0 589 aaKnown RBP17.53■□□□□ 0.4
SNRPB-201ENST00000381342 PCDHGC5Q9Y5F6 944 aa17.53■□□□□ 0.4
SNRPB-201ENST00000381342 TSC2P49815 1807 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 TRIM49BA6NDI0 452 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 ZNF233A6NK53 670 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 PODXLO00592 558 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 FSCN2O14926 492 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 PER2O15055 1255 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 IL9P15248 144 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 NR2F2P24468 414 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 IGFBP6P24592 240 aaPredicted RBP17.52■□□□□ 0.4
SNRPB-201ENST00000381342 CASP4P49662 377 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 PMS1P54277 932 aaKnown RBP17.52■□□□□ 0.4
SNRPB-201ENST00000381342 POU5F1Q01860 360 aaKnown RBP17.52■□□□□ 0.4
SNRPB-201ENST00000381342 CYP24A1Q07973 514 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 ZBTB6Q15916 424 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 LMBRD2Q68DH5 695 aaPredicted RBP17.52■□□□□ 0.4
SNRPB-201ENST00000381342 KLHL10Q6JEL2 608 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 ADGRD2Q7Z7M1 963 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 SLC9A9Q8IVB4 645 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 TRIML1Q8N9V2 468 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 C3orf58Q8NDZ4 430 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 UROC1Q96N76 676 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 COLEC11Q9BWP8 271 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 KIAA1586Q9HCI6 787 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 ADAM28Q9UKQ2 775 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 CTNND2Q9UQB3 1225 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 DERAQ9Y315 318 aa17.52■□□□□ 0.4
SNRPB-201ENST00000381342 MYO7AQ13402 2215 aa17.52■□□□□ 0.39
SNRPB-201ENST00000381342 A0A0C4DFX4 3053 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 PTPRJQ12913 1337 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 PPP1R3GB7ZBB8 358 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 PSMA7O14818 248 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 LINC01565O15544 149 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 XPOTO43592 962 aaKnown RBP17.51■□□□□ 0.39
SNRPB-201ENST00000381342 CXCL14O95715 111 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 SCN1AP35498 2009 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 LTBRP36941 435 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 SMAD4Q13485 552 aaKnown RBP17.51■□□□□ 0.39
SNRPB-201ENST00000381342 NFIL3Q16649 462 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 DUSP6Q16828 381 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 UPP1Q16831 310 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 SPATA1Q5VX52 437 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 CEP135Q66GS9 1140 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 CENPPQ6IPU0 288 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 DDX53Q86TM3 631 aaKnown RBP17.51■□□□□ 0.39
SNRPB-201ENST00000381342 VPS52Q8N1B4 723 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 BEST2Q8NFU1 509 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 PRKAG3Q9UGI9 489 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 C2CD2Q9Y426 696 aa17.51■□□□□ 0.39
SNRPB-201ENST00000381342 PPEF2O14830 753 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 MBTPS2O43462 519 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 B3GAT3O94766 335 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 TFAMQ00059 246 aaKnown RBP17.5■□□□□ 0.39
SNRPB-201ENST00000381342 PSMD6Q15008 389 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 EDRF1Q3B7T1 1238 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 ANKRD40Q6AI12 368 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 FUT10Q6P4F1 479 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 GJD3Q8N144 294 aa17.5■□□□□ 0.39
SNRPB-201ENST00000381342 TMEM174Q8WUU8 243 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms