RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 CBWD2Q8IUF1 395 aa21.03■□□□□ 0.96
GTF3A-201ENST00000381140 ASB7Q9H672 318 aa21.03■□□□□ 0.96
GTF3A-201ENST00000381140 ZNF233A6NK53 670 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 I3L4J1 428 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 SOD2P04179 222 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 ADRB2P07550 413 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 GLUD2P49448 558 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 WNT7BP56706 349 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 FAM171A1Q5VUB5 890 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 CEP57Q86XR8 500 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 XXYLT1Q8NBI6 393 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 C3orf58Q8NDZ4 430 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 BEST2Q8NFU1 509 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 GOLGA5Q8TBA6 731 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 KCTD10Q9H3F6 313 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 PDE11AQ9HCR9 933 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 TMEM63CQ9P1W3 806 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 NUB1Q9Y5A7 615 aa21.02■□□□□ 0.96
GTF3A-201ENST00000381140 C2orf71A6NGG8 1288 aa21.01■□□□□ 0.95
GTF3A-201ENST00000381140 BIN1O00499 593 aa21.01■□□□□ 0.95
GTF3A-201ENST00000381140 EXOC3O60645 756 aa21.01■□□□□ 0.95
GTF3A-201ENST00000381140 RPL9P32969 192 aaKnown RBP21.01■□□□□ 0.95
GTF3A-201ENST00000381140 BRCC3P46736 316 aa21.01■□□□□ 0.95
GTF3A-201ENST00000381140 TFAMQ00059 246 aaKnown RBP21.01■□□□□ 0.95
GTF3A-201ENST00000381140 ZBTB6Q15916 424 aa21.01■□□□□ 0.95
GTF3A-201ENST00000381140 CCDC183Q5T5S1 534 aa21.01■□□□□ 0.95
GTF3A-201ENST00000381140 ZNF658Q5TYW1 1059 aaPredicted RBP21.01■□□□□ 0.95
GTF3A-201ENST00000381140 EFCAB13Q8IY85 973 aa21.01■□□□□ 0.95
GTF3A-201ENST00000381140 ELOA2Q8IYF1 753 aaPredicted RBP21.01■□□□□ 0.95
GTF3A-201ENST00000381140 GUF1Q8N442 669 aaKnown RBP21.01■□□□□ 0.95
GTF3A-201ENST00000381140 MRPL43Q8N983 215 aaKnown RBP21.01■□□□□ 0.95
GTF3A-201ENST00000381140 FAM84AQ96KN4 292 aa21.01■□□□□ 0.95
GTF3A-201ENST00000381140 KIAA1586Q9HCI6 787 aa21.01■□□□□ 0.95
GTF3A-201ENST00000381140 MRPL17Q9NRX2 175 aaKnown RBP21.01■□□□□ 0.95
GTF3A-201ENST00000381140 CLDND1Q9NY35 253 aa21.01■□□□□ 0.95
GTF3A-201ENST00000381140 CGNQ9P2M7 1197 aaKnown RBP21.01■□□□□ 0.95
GTF3A-201ENST00000381140 STK39Q9UEW8 545 aa21.01■□□□□ 0.95
GTF3A-201ENST00000381140 MAN1B1Q9UKM7 699 aa21.01■□□□□ 0.95
GTF3A-201ENST00000381140 PRUNE2Q8WUY3 3088 aa21.01■□□□□ 0.95
GTF3A-201ENST00000381140 PLXNA3P51805 1871 aa21■□□□□ 0.95
GTF3A-201ENST00000381140 PDXKO00764 312 aa21■□□□□ 0.95
GTF3A-201ENST00000381140 LINC01565O15544 149 aa21■□□□□ 0.95
GTF3A-201ENST00000381140 CALUO43852 315 aaPredicted RBP21■□□□□ 0.95
GTF3A-201ENST00000381140 NR3C1P04150 777 aa21■□□□□ 0.95
GTF3A-201ENST00000381140 POU5F1Q01860 360 aaKnown RBP21■□□□□ 0.95
GTF3A-201ENST00000381140 PTPN14Q15678 1187 aa21■□□□□ 0.95
GTF3A-201ENST00000381140 SNRNP35Q16560 246 aaKnown RBP21■□□□□ 0.95
GTF3A-201ENST00000381140 USP41Q3LFD5 358 aa21■□□□□ 0.95
GTF3A-201ENST00000381140 SPATA1Q5VX52 437 aa21■□□□□ 0.95
GTF3A-201ENST00000381140 SPATA20Q8TB22 786 aa21■□□□□ 0.95
GTF3A-201ENST00000381140 RIN2Q8WYP3 895 aaPredicted RBP21■□□□□ 0.95
GTF3A-201ENST00000381140 TSPAN18Q96SJ8 248 aa21■□□□□ 0.95
GTF3A-201ENST00000381140 DERAQ9Y315 318 aa21■□□□□ 0.95
GTF3A-201ENST00000381140 TMEM189-UBE2V1I3L0A0 370 aa20.99■□□□□ 0.95
GTF3A-201ENST00000381140 CYP3A5P20815 502 aa20.99■□□□□ 0.95
GTF3A-201ENST00000381140 PRCPP42785 496 aa20.99■□□□□ 0.95
GTF3A-201ENST00000381140 ELAVL2Q12926 359 aaKnown RBP20.99■□□□□ 0.95
GTF3A-201ENST00000381140 LMBRD2Q68DH5 695 aaPredicted RBP20.99■□□□□ 0.95
GTF3A-201ENST00000381140 LLGL2Q6P1M3 1020 aa20.99■□□□□ 0.95
GTF3A-201ENST00000381140 CD300LGQ6UXG3 332 aa20.99■□□□□ 0.95
GTF3A-201ENST00000381140 C12orf56Q8IXR9 622 aa20.99■□□□□ 0.95
GTF3A-201ENST00000381140 RNF168Q8IYW5 571 aaPredicted RBP20.99■□□□□ 0.95
GTF3A-201ENST00000381140 HLA-CQ95604 372 aa20.99■□□□□ 0.95
GTF3A-201ENST00000381140 DPP3Q9NY33 737 aa20.99■□□□□ 0.95
GTF3A-201ENST00000381140 C2CD2Q9Y426 696 aa20.99■□□□□ 0.95
GTF3A-201ENST00000381140 PPEF2O14830 753 aa20.98■□□□□ 0.95
GTF3A-201ENST00000381140 EFEMP2O95967 443 aa20.98■□□□□ 0.95
GTF3A-201ENST00000381140 RBM10P98175 930 aaKnown RBP20.98■□□□□ 0.95
GTF3A-201ENST00000381140 DUSP6Q16828 381 aa20.98■□□□□ 0.95
GTF3A-201ENST00000381140 CEP135Q66GS9 1140 aa20.98■□□□□ 0.95
GTF3A-201ENST00000381140 PRSS55Q6UWB4 352 aaPredicted RBP20.98■□□□□ 0.95
GTF3A-201ENST00000381140 GLYCTKQ8IVS8 523 aa20.98■□□□□ 0.95
GTF3A-201ENST00000381140 CCDC127Q96BQ5 260 aa20.98■□□□□ 0.95
GTF3A-201ENST00000381140 THEGQ9P2T0 379 aa20.98■□□□□ 0.95
GTF3A-201ENST00000381140 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.98■□□□□ 0.95
GTF3A-201ENST00000381140 TRAPPC3O43617 180 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 DLATP10515 647 aaKnown RBP20.97■□□□□ 0.95
GTF3A-201ENST00000381140 KCNA5P22460 613 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 LRPAP1P30533 357 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 DSG1Q02413 1049 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 CYP24A1Q07973 514 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 RTP2Q5QGT7 225 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 KIAA0319Q5VV43 1072 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 CACTINQ8WUQ7 758 aaKnown RBP20.97■□□□□ 0.95
GTF3A-201ENST00000381140 PABPC5Q96DU9 382 aaKnown RBP20.97■□□□□ 0.95
GTF3A-201ENST00000381140 FBXL18Q96ME1 805 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 TTPALQ9BTX7 342 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 EMILIN2Q9BXX0 1053 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 CLSTN2Q9H4D0 955 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 UBE2ZQ9H832 354 aaPredicted RBP20.97■□□□□ 0.95
GTF3A-201ENST00000381140 SSX2IPQ9Y2D8 614 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 CLASP2O75122 1294 aaKnown RBP20.97■□□□□ 0.95
GTF3A-201ENST00000381140 CNPP09543 421 aaKnown RBP20.97■□□□□ 0.95
GTF3A-201ENST00000381140 TMEM191BP0C7N4 346 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 RPL17P18621 184 aaKnown RBP20.97■□□□□ 0.95
GTF3A-201ENST00000381140 KLRC2P26717 231 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 TKTP29401 623 aaKnown RBP20.97■□□□□ 0.95
GTF3A-201ENST00000381140 NDUFV1P49821 464 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 TFF2Q03403 129 aa20.97■□□□□ 0.95
GTF3A-201ENST00000381140 SURF1Q15526 300 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms