RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PAGE5Q96GU1 130 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 IGSF21Q96ID5 467 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 ACCSQ96QU6 501 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 PRRX2Q99811 253 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 TCF25Q9BQ70 676 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 COLEC11Q9BWP8 271 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 FGFBP2Q9BYJ0 223 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 GOLPH3LQ9H4A5 285 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 ST6GALNAC4Q9H4F1 302 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 IGFLR1Q9H665 355 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 OLFML3Q9NRN5 406 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 TOPORSQ9NS56 1045 aaPredicted RBP10.08□□□□□ -0.8
HMGN1-202ENST00000380747 CHMP5Q9NZZ3 219 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 USP25Q9UHP3 1055 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 EXOC7Q9UPT5 735 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 LZTS1Q9Y250 596 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 HPSEQ9Y251 543 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 MYO7AQ13402 2215 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 ZMYM2Q9UBW7 1377 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 TECTAO75443 2155 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 VPS13AQ96RL7 3174 aa10.08□□□□□ -0.8
HMGN1-202ENST00000380747 FAM237AA0A1B0GTK4 181 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 CASTOR2A6NHX0 329 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 TISP43B9A030 160 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 PTGESO14684 152 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 PRPF6O94906 941 aaKnown RBP10.07□□□□□ -0.8
HMGN1-202ENST00000380747 LTBRP36941 435 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 DSC1Q08554 894 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 TUSC3Q13454 348 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 ALCAMQ13740 583 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 BMS1Q14692 1282 aaKnown RBP10.07□□□□□ -0.8
HMGN1-202ENST00000380747 L1TD1Q5T7N2 865 aaKnown RBP10.07□□□□□ -0.8
HMGN1-202ENST00000380747 SLFN12LQ6IEE8 588 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 CNNM4Q6P4Q7 775 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 STXBP4Q6ZWJ1 553 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 UNC13DQ70J99 1090 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 ADGRD2Q7Z7M1 963 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 DDX53Q86TM3 631 aaKnown RBP10.07□□□□□ -0.8
HMGN1-202ENST00000380747 PPP2R3CQ969Q6 453 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 MSTO1Q9BUK6 570 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 HAPLN2Q9GZV7 340 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 IKZF4Q9H2S9 585 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 CACNG4Q9UBN1 327 aa10.07□□□□□ -0.8
HMGN1-202ENST00000380747 SMIM28A0A1B0GU29 152 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 F8W810 466 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 FSCN2O14926 492 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 PER2O15055 1255 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 OGTO15294 1046 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 HRO43593 1189 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 TADA2AO75478 443 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 CXCL14O95715 111 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 CLTAP09496 248 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 CXCL8P10145 99 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 GTF2F1P35269 517 aaKnown RBP eCLIP10.06□□□□□ -0.8
HMGN1-202ENST00000380747 TNFSF9P41273 254 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 NRIP1P48552 1158 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 PTPN5P54829 565 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 KCNA1Q09470 495 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 HYAL1Q12794 435 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 SMC1AQ14683 1233 aaKnown RBP10.06□□□□□ -0.8
HMGN1-202ENST00000380747 KYAT1Q16773 422 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 FAM26FQ5R3K3 315 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 ZBTB41Q5SVQ8 909 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 PDE12Q6L8Q7 609 aaKnown RBP10.06□□□□□ -0.8
HMGN1-202ENST00000380747 SLC39A4Q6P5W5 647 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 KRBA2Q6ZNG9 492 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 VPS52Q8N1B4 723 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 TMEM87AQ8NBN3 555 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 GLIS3Q8NEA6 775 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 AUTS2Q8WXX7 1259 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 POMGNT1Q8WZA1 660 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 EDAQ92838 391 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 STRA6Q9BX79 667 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 TLE6Q9H808 572 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 TMEM206Q9H813 350 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 NGRNQ9NPE2 291 aaKnown RBP10.06□□□□□ -0.8
HMGN1-202ENST00000380747 MARCH5Q9NX47 278 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 CLDND1Q9NY35 253 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 MYH11P35749 1972 aa10.06□□□□□ -0.8
HMGN1-202ENST00000380747 RIF1Q5UIP0 2472 aaKnown RBP10.05□□□□□ -0.8
HMGN1-202ENST00000380747 A0A0B4J269 797 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 PVALEFA0A1B0GWK0 134 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 HIDE1A8MVS5 230 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 MBTPS2O43462 519 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 ZNF202O95125 648 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 KCNE1P15382 129 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 USP46P62068 366 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 PPP2R3AQ06190 1150 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 SPAG1Q07617 926 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 SMAD4Q13485 552 aaKnown RBP10.05□□□□□ -0.8
HMGN1-202ENST00000380747 HSP90AA2PQ14568 343 aaPredicted RBP10.05□□□□□ -0.8
HMGN1-202ENST00000380747 POSTNQ15063 836 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 NAB2Q15742 525 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 SLC10A6Q3KNW5 377 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 XKR4Q5GH76 650 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 ALKAL1Q6UXT8 129 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 NELFCDQ8IXH7 590 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 HASPINQ8TF76 798 aa10.05□□□□□ -0.8
HMGN1-202ENST00000380747 NOC3LQ8WTT2 800 aaKnown RBP10.05□□□□□ -0.8
HMGN1-202ENST00000380747 ZMAT2Q96NC0 199 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms