RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 DUOXA2Q1HG44 320 aa20.33■□□□□ 0.84
SMN2-202ENST00000380742 USP37Q86T82 979 aa20.33■□□□□ 0.84
SMN2-202ENST00000380742 FIBCD1Q8N539 461 aa20.33■□□□□ 0.84
SMN2-202ENST00000380742 BEST2Q8NFU1 509 aa20.33■□□□□ 0.84
SMN2-202ENST00000380742 CACTINQ8WUQ7 758 aaKnown RBP20.33■□□□□ 0.84
SMN2-202ENST00000380742 PAAF1Q9BRP4 392 aa20.33■□□□□ 0.84
SMN2-202ENST00000380742 PBX4Q9BYU1 374 aa20.33■□□□□ 0.84
SMN2-202ENST00000380742 DPP3Q9NY33 737 aa20.33■□□□□ 0.84
SMN2-202ENST00000380742 YBX2Q9Y2T7 364 aaKnown RBP20.33■□□□□ 0.84
SMN2-202ENST00000380742 CASTOR2A6NHX0 329 aa20.32■□□□□ 0.84
SMN2-202ENST00000380742 XPOTO43592 962 aaKnown RBP20.32■□□□□ 0.84
SMN2-202ENST00000380742 ARHGEF15O94989 841 aa20.32■□□□□ 0.84
SMN2-202ENST00000380742 C4BPAP04003 597 aaKnown RBP20.32■□□□□ 0.84
SMN2-202ENST00000380742 TMEM191BP0C7N4 346 aa20.32■□□□□ 0.84
SMN2-202ENST00000380742 LINC00271P0C7V0 271 aa20.32■□□□□ 0.84
SMN2-202ENST00000380742 ATP1A3P13637 1013 aa20.32■□□□□ 0.84
SMN2-202ENST00000380742 EEF1GP26641 437 aaKnown RBP20.32■□□□□ 0.84
SMN2-202ENST00000380742 GCLMP48507 274 aa20.32■□□□□ 0.84
SMN2-202ENST00000380742 C1orf127Q8N9H9 656 aa20.32■□□□□ 0.84
SMN2-202ENST00000380742 CXorf38Q8TB03 319 aa20.32■□□□□ 0.84
SMN2-202ENST00000380742 RABGGTAQ92696 567 aa20.32■□□□□ 0.84
SMN2-202ENST00000380742 ANKRD36BP1Q96IX9 119 aa20.32■□□□□ 0.84
SMN2-202ENST00000380742 MMRN2Q9H8L6 949 aa20.32■□□□□ 0.84
SMN2-202ENST00000380742 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.32■□□□□ 0.84
SMN2-202ENST00000380742 CHD9Q3L8U1 2897 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 A0A1W2PPC1 479 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 LINC01553A4QN01 128 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 ZC3H11AO75152 810 aaKnown RBP eCLIP20.31■□□□□ 0.84
SMN2-202ENST00000380742 TNNC2P02585 160 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 CA3P07451 260 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 IGFBP6P24592 240 aaPredicted RBP20.31■□□□□ 0.84
SMN2-202ENST00000380742 LRPAP1P30533 357 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 CLCNKBP51801 687 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 AP3M2P53677 418 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 TDRD10Q5VZ19 366 aaKnown RBP20.31■□□□□ 0.84
SMN2-202ENST00000380742 C15orf39Q6ZRI6 1047 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 SV2AQ7L0J3 742 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 TRAPPC11Q7Z392 1133 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 TUBGCP2Q9BSJ2 902 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 RBSNQ9H1K0 784 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 SIX4Q9UIU6 781 aa20.31■□□□□ 0.84
SMN2-202ENST00000380742 PLXNA4Q9HCM2 1894 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 LAMA3Q16787 3333 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 GOLGA6L19H0YKK7 550 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 PPEF2O14830 753 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 ITGB3P05106 788 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 GALTP07902 379 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 CDK11BP21127 795 aaKnown RBP20.3■□□□□ 0.84
SMN2-202ENST00000380742 GTF2H1P32780 548 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 PBX3P40426 434 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 SLC11A1P49279 550 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 BCAR1P56945 870 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 KCNH2Q12809 1159 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 KRT31Q15323 416 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 MAN2A1Q16706 1144 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 UPP1Q16831 310 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 ZACNQ401N2 412 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 CBWD6Q4V339 395 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 CBWD3Q5JTY5 395 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 CBWD5Q5RIA9 395 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 CLP1Q92989 425 aaKnown RBP20.3■□□□□ 0.84
SMN2-202ENST00000380742 TMEM175Q9BSA9 504 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 TMEM8AQ9HCN3 771 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 TAB2Q9NYJ8 693 aa20.3■□□□□ 0.84
SMN2-202ENST00000380742 LIMA1Q9UHB6 759 aaKnown RBP20.3■□□□□ 0.84
SMN2-202ENST00000380742 ANO9A1A5B4 782 aa20.29■□□□□ 0.84
SMN2-202ENST00000380742 F8W810 466 aa20.29■□□□□ 0.84
SMN2-202ENST00000380742 NRP1O14786 923 aa20.29■□□□□ 0.84
SMN2-202ENST00000380742 STX10O60499 249 aa20.29■□□□□ 0.84
SMN2-202ENST00000380742 CST3P01034 146 aaPredicted RBP20.29■□□□□ 0.84
SMN2-202ENST00000380742 ALDH2P05091 517 aa20.29■□□□□ 0.84
SMN2-202ENST00000380742 RPL9P32969 192 aaKnown RBP20.29■□□□□ 0.84
SMN2-202ENST00000380742 OR1G1P47890 313 aa20.29■□□□□ 0.84
SMN2-202ENST00000380742 RAB30Q15771 203 aa20.29■□□□□ 0.84
SMN2-202ENST00000380742 MIIPQ5JXC2 388 aa20.29■□□□□ 0.84
SMN2-202ENST00000380742 SPOUT1Q5T280 376 aaKnown RBP20.29■□□□□ 0.84
SMN2-202ENST00000380742 C9orf57Q5W0N0 161 aa20.29■□□□□ 0.84
SMN2-202ENST00000380742 APTXQ7Z2E3 356 aaKnown RBP20.29■□□□□ 0.84
SMN2-202ENST00000380742 SPRED2Q7Z698 418 aa20.29■□□□□ 0.84
SMN2-202ENST00000380742 UROC1Q96N76 676 aa20.29■□□□□ 0.84
SMN2-202ENST00000380742 ITGA11Q9UKX5 1188 aa20.29■□□□□ 0.84
SMN2-202ENST00000380742 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.29■□□□□ 0.84
SMN2-202ENST00000380742 NT5C1B-RDH14C9J2C7 533 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 PODXLO00592 558 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 PIRO00625 290 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 VNN1O95497 513 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 AFPP02771 609 aaKnown RBP20.28■□□□□ 0.84
SMN2-202ENST00000380742 PRKCSHP14314 528 aaPredicted RBP20.28■□□□□ 0.84
SMN2-202ENST00000380742 LAG3P18627 525 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 POLR2BP30876 1174 aaKnown RBP20.28■□□□□ 0.84
SMN2-202ENST00000380742 FMO5P49326 533 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 MXI1P50539 228 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 SMAD3P84022 425 aaKnown RBP20.28■□□□□ 0.84
SMN2-202ENST00000380742 BIRC3Q13489 604 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 LRIT3Q3SXY7 679 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 VWA3BQ502W6 1294 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 KRT39Q6A163 491 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 KCNT2Q6UVM3 1135 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 CD300LGQ6UXG3 332 aa20.28■□□□□ 0.84
SMN2-202ENST00000380742 COLGALT1Q8NBJ5 622 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms