RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 F8W810 466 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 SOX1O00570 391 aaPredicted RBP13.7□□□□□ -0.22
SMN1-202ENST00000380707 GNA14O95837 355 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 GALTP07902 379 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 KRT13P13646 458 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 CYP3A5P20815 502 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 SLC11A1P49279 550 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 CLCNKBP51801 687 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 ZNF445P59923 1031 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 IQCB1Q15051 598 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 DUOXA2Q1HG44 320 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 CCDC40Q4G0X9 1142 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 KCNT2Q6UVM3 1135 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 NT5DC4Q86YG4 428 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 C17orf80Q9BSJ5 609 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 MTMR12Q9C0I1 747 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 HSD3B7Q9H2F3 369 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 FANCLQ9NW38 375 aa13.7□□□□□ -0.22
SMN1-202ENST00000380707 PDCD11Q14690 1871 aaKnown RBP13.7□□□□□ -0.22
SMN1-202ENST00000380707 SPTBN5Q9NRC6 3674 aaKnown RBP13.7□□□□□ -0.22
SMN1-202ENST00000380707 NRP1O14786 923 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 IKBKBO14920 756 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 ALDH2P05091 517 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 OR1G1P47890 313 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 ALDH7A1P49419 539 aaKnown RBP13.69□□□□□ -0.22
SMN1-202ENST00000380707 MARSP56192 900 aaKnown RBP13.69□□□□□ -0.22
SMN1-202ENST00000380707 ENPEPQ07075 957 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 PPP3CAQ08209 521 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 UPP1Q16831 310 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 PPP2R2DQ66LE6 453 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 TMEM173Q86WV6 379 aaPredicted RBP13.69□□□□□ -0.22
SMN1-202ENST00000380707 CREBRFQ8IUR6 639 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 C1orf127Q8N9H9 656 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 COLGALT1Q8NBJ5 622 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 BEST2Q8NFU1 509 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 CXorf38Q8TB03 319 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 CACTINQ8WUQ7 758 aaKnown RBP13.69□□□□□ -0.22
SMN1-202ENST00000380707 TIFAQ96CG3 184 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 CNOT6LQ96LI5 555 aaKnown RBP13.69□□□□□ -0.22
SMN1-202ENST00000380707 TMEM175Q9BSA9 504 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 TSPY26PQ9H489 355 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 SLC28A3Q9HAS3 691 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 CBX8Q9HC52 389 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 METTL14Q9HCE5 456 aaKnown RBP13.69□□□□□ -0.22
SMN1-202ENST00000380707 DPP3Q9NY33 737 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 MTUS1Q9ULD2 1270 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 PRG3Q9Y2Y8 225 aaPredicted RBP13.69□□□□□ -0.22
SMN1-202ENST00000380707 PPEF2O14830 753 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 XPOTO43592 962 aaKnown RBP13.69□□□□□ -0.22
SMN1-202ENST00000380707 CAVIN2O95810 425 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 TMEM191BP0C7N4 346 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 LAG3P18627 525 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 LRPAP1P30533 357 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 BMPR1AP36894 532 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 EPC2Q52LR7 807 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 DCAF17Q5H9S7 520 aaPredicted RBP13.69□□□□□ -0.22
SMN1-202ENST00000380707 CDKAL1Q5VV42 579 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 TCERG1LQ5VWI1 586 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 TRAPPC11Q7Z392 1133 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 USP37Q86T82 979 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 TRIM59Q8IWR1 403 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 C3orf58Q8NDZ4 430 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 BCL7CQ8WUZ0 217 aaPredicted RBP13.69□□□□□ -0.22
SMN1-202ENST00000380707 SLC35C1Q96A29 364 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 ANKRD36BP1Q96IX9 119 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 ZNF558Q96NG5 402 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 TGS1Q96RS0 853 aaKnown RBP13.69□□□□□ -0.22
SMN1-202ENST00000380707 CERS4Q9HA82 394 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 AAASQ9NRG9 546 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 SIX4Q9UIU6 781 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 FAN1Q9Y2M0 1017 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 XIRP2A4UGR9 3374 aa13.69□□□□□ -0.22
SMN1-202ENST00000380707 KIAA1671Q9BY89 1806 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 ANO9A1A5B4 782 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 PODXLO00592 558 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 KIF4AO95239 1232 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 TNNC2P02585 160 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 C4BPAP04003 597 aaKnown RBP13.68□□□□□ -0.22
SMN1-202ENST00000380707 ITGB3P05106 788 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 ITGB1P05556 798 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 RPL9P32969 192 aaKnown RBP13.68□□□□□ -0.22
SMN1-202ENST00000380707 CTNNB1P35222 781 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 GCLMP48507 274 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 ERVK-21P61565 698 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 TCP11X2Q5H9J9 407 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 TDRD10Q5VZ19 366 aaKnown RBP13.68□□□□□ -0.22
SMN1-202ENST00000380707 C9orf57Q5W0N0 161 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 CD300LGQ6UXG3 332 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 SV2AQ7L0J3 742 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 LUZP1Q86V48 1076 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 DDX27Q96GQ7 796 aaKnown RBP13.68□□□□□ -0.22
SMN1-202ENST00000380707 UROC1Q96N76 676 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 MMRN2Q9H8L6 949 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 MARCH5Q9NX47 278 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 PCDHB12Q9Y5F1 795 aa13.68□□□□□ -0.22
SMN1-202ENST00000380707 SMTNL1A8MU46 457 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 BECN2A8MW95 431 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 KCNJ18B7U540 433 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 PIRO00625 290 aa13.67□□□□□ -0.22
SMN1-202ENST00000380707 B3GAT3O94766 335 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms