RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 RNF10Q8N5U6 811 aaKnown RBP11.56□□□□□ -0.56
NEDD9-201ENST00000379433 SNRNP27Q8WVK2 155 aaKnown RBP11.56□□□□□ -0.56
NEDD9-201ENST00000379433 AMFRQ9UKV5 643 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 PTPN22Q9Y2R2 807 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 BTBD19C9JJ37 291 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 PIK3R2O00459 728 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 PJA2O43164 708 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 LAMTOR4Q0VGL1 99 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 MEI1Q5TIA1 1274 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 TDRD10Q5VZ19 366 aaKnown RBP11.55□□□□□ -0.56
NEDD9-201ENST00000379433 TMEM192Q8IY95 271 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 PSPC1Q8WXF1 523 aaKnown RBP11.55□□□□□ -0.56
NEDD9-201ENST00000379433 KRT35Q92764 455 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 RPS6KC1Q96S38 1066 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 MAFBQ9Y5Q3 323 aaPredicted RBP11.55□□□□□ -0.56
NEDD9-201ENST00000379433 GTPBP10A4D1E9 387 aaKnown RBP11.55□□□□□ -0.56
NEDD9-201ENST00000379433 GLTPD2A6NH11 291 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 ATP2A1O14983 1001 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 CST3P01034 146 aaPredicted RBP11.55□□□□□ -0.56
NEDD9-201ENST00000379433 TRPC1P48995 793 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 ALCAMQ13740 583 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 PLCB4Q15147 1175 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 BRDTQ58F21 947 aaPredicted RBP11.55□□□□□ -0.56
NEDD9-201ENST00000379433 FMNL3Q8IVF7 1028 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 CHCHD4Q8N4Q1 142 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 EPS8L1Q8TE68 723 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 VMP1Q96GC9 406 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 SELENOOQ9BVL4 669 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 APOL6Q9BWW8 343 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 KLHL11Q9NVR0 708 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 UBE4BO95155 1302 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 CYP11B1P15538 503 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 TMOD1P28289 359 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 LMAN1P49257 510 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 TUBB2AQ13885 445 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 KCTD16Q68DU8 428 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 FOXR2Q6PJQ5 311 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 FASTKD5Q7L8L6 764 aaKnown RBP11.55□□□□□ -0.56
NEDD9-201ENST00000379433 SLC9A9Q8IVB4 645 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 C11orf70Q9BRQ4 267 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 TUBB2BQ9BVA1 445 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 MINDY3Q9H8M7 445 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 TMEM8AQ9HCN3 771 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 ARHGAP28Q9P2N2 729 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 NOC2LQ9Y3T9 749 aaKnown RBP11.55□□□□□ -0.56
NEDD9-201ENST00000379433 EVPLQ92817 2033 aa11.55□□□□□ -0.56
NEDD9-201ENST00000379433 BOLA2-SMG1P6H3BVE0 249 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 CXCL11O14625 94 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 RAD51CO43502 376 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 ADCY2Q08462 1091 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 ZNF568Q3ZCX4 644 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 C10orf62Q5T681 223 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-201ENST00000379433 GPRC5AQ8NFJ5 357 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 MPP4Q96JB8 637 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 GPR20Q99678 358 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 NUP85Q9BW27 656 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 L1RE1Q9UN81 338 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 PRKCBP05771 671 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 FAM153BP0C7A2 387 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 INSRRP14616 1297 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 CD19P15391 556 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 HOXA7P31268 230 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-201ENST00000379433 VPS41P49754 854 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 SESN3P58005 492 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 GHRHRQ02643 423 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 SNX1Q13596 522 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 DOCK1Q14185 1865 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 MAPK6Q16659 721 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 FAM153CQ494X1 144 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 USP50Q70EL3 339 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-201ENST00000379433 MSANTD4Q8NCY6 345 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 NLRP7Q8WX94 980 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 DHX33Q9H6R0 707 aaKnown RBP11.54□□□□□ -0.56
NEDD9-201ENST00000379433 FAM153AQ9UHL3 310 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 ALG6Q9Y672 507 aa11.54□□□□□ -0.56
NEDD9-201ENST00000379433 BRCA1P38398 1863 aaKnown RBP11.54□□□□□ -0.56
NEDD9-201ENST00000379433 hCG_2014768A0A024R1R8 64 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 THAP12O43422 761 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 PRKCIP41743 596 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 RAP1GAPP47736 663 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 PPIL2Q13356 520 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 TTLL4Q14679 1199 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 IFI16Q16666 785 aaKnown RBP11.53□□□□□ -0.56
NEDD9-201ENST00000379433 CELF3Q5SZQ8 465 aaKnown RBP11.53□□□□□ -0.56
NEDD9-201ENST00000379433 EEF1DP3Q658K8 133 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 GPAT2Q6NUI2 795 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 USP37Q86T82 979 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 RDM1Q8NG50 284 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 CYFIP2Q96F07 1278 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 STIM2Q9P246 746 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 PCDHGC5Q9Y5F6 944 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 NFASCO94856 1347 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 A0A087WZ62 844 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 TRPC3Q13507 836 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 TSNAXIP1Q2TAA8 658 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 HELQQ8TDG4 1101 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 RFFLQ8WZ73 363 aa11.53□□□□□ -0.56
NEDD9-201ENST00000379433 ACSF2Q96CM8 615 aaPredicted RBP11.53□□□□□ -0.56
NEDD9-201ENST00000379433 MPHOSPH6Q99547 160 aaKnown RBP11.53□□□□□ -0.56
NEDD9-201ENST00000379433 FDXACB1Q9BRP7 624 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms