RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 FBXO31Q5XUX0 539 aaPredicted RBP11.15□□□□□ -0.62
RTN3-206ENST00000377819 SLC30A9Q6PML9 568 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 SNX31Q8N9S9 440 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 MDM1Q8TC05 714 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 AGR3Q8TD06 166 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 CALML6Q8TD86 181 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 SDR42E1Q8WUS8 393 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 NARS2Q96I59 477 aaKnown RBP11.15□□□□□ -0.62
RTN3-206ENST00000377819 PACSIN1Q9BY11 444 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 RNF26Q9BY78 433 aaPredicted RBP11.15□□□□□ -0.62
RTN3-206ENST00000377819 SERHL2Q9H4I8 314 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 SERHLQ9NQF3 203 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 KLHL28Q9NXS3 571 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 ABI2Q9NYB9 513 aaPredicted RBP11.15□□□□□ -0.62
RTN3-206ENST00000377819 MORC2Q9Y6X9 1032 aaPredicted RBP11.15□□□□□ -0.62
RTN3-206ENST00000377819 NEO1Q92859 1461 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 ABCC12Q96J65 1359 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 UBN2Q6ZU65 1347 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 PIK3CDO00329 1044 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 FEN1P39748 380 aaKnown RBP11.15□□□□□ -0.62
RTN3-206ENST00000377819 JAK3P52333 1124 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 GPC5P78333 572 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 CTTNQ14247 550 aaKnown RBP11.15□□□□□ -0.62
RTN3-206ENST00000377819 POTEAQ6S8J7 498 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 COMMD2Q86X83 199 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 C19orf18Q8NEA5 215 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 CAMKK2Q96RR4 588 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 NEUROD4Q9HD90 331 aa11.15□□□□□ -0.62
RTN3-206ENST00000377819 ZMYM6O95789 1325 aa11.15□□□□□ -0.63
RTN3-206ENST00000377819 DDHD2O94830 711 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 GSTM1P09488 218 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 COPB2P35606 906 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 GRK3P35626 688 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 GYG1P46976 350 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 FNTAP49354 379 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 CACNB1Q02641 598 aaPredicted RBP11.14□□□□□ -0.63
RTN3-206ENST00000377819 ZNF618Q5T7W0 954 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 ATAD3BQ5T9A4 648 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 FBXO42Q6P3S6 717 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 TMEM270Q6UE05 265 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 CCDC81Q6ZN84 652 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 XXYLT1Q8NBI6 393 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 RNF25Q96BH1 459 aaPredicted RBP11.14□□□□□ -0.63
RTN3-206ENST00000377819 C11orf70Q9BRQ4 267 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 VAV3Q9UKW4 847 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 CAMSAP1Q5T5Y3 1602 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 CAND2O75155 1236 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 ABCB1P08183 1280 aaPredicted RBP11.14□□□□□ -0.63
RTN3-206ENST00000377819 ARF5P84085 180 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 ROR1Q01973 937 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 MKRN3Q13064 507 aaKnown RBP11.14□□□□□ -0.63
RTN3-206ENST00000377819 C1DQ13901 141 aaKnown RBP11.14□□□□□ -0.63
RTN3-206ENST00000377819 DNAL1Q4LDG9 190 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 FAM9CQ8IZT9 166 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 KCNV2Q8TDN2 545 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 TBCKQ8TEA7 893 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 ECSITQ9BQ95 431 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 PHACTR1Q9C0D0 580 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 NDST4Q9H3R1 872 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 ARMC7Q9H6L4 198 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 ING3Q9NXR8 418 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 CD274Q9NZQ7 290 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 LINC00854A0A1B0GVQ3 168 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 PFKFB2O60825 505 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 CNOT3O75175 753 aaKnown RBP11.14□□□□□ -0.63
RTN3-206ENST00000377819 STX11O75558 287 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 ASNSP08243 561 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 PLA2G4BP0C869 781 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 TRIM49P0CI25 452 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 TRIM49CP0CI26 452 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 GUCY1A2P33402 732 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 ARHGDIBP52566 201 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 PDIA2Q13087 525 aaKnown RBP11.14□□□□□ -0.63
RTN3-206ENST00000377819 CAMK1Q14012 370 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 KRT31Q15323 416 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 RHPN2Q8IUC4 686 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 NUP85Q9BW27 656 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 SH3BP1Q9Y3L3 701 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 RWDD3Q9Y3V2 267 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 M0QYV0 167 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 NPY2RP49146 381 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 KCNK10P57789 538 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 C2orf54Q08AI8 447 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 SETD3Q86TU7 594 aaPredicted RBP11.14□□□□□ -0.63
RTN3-206ENST00000377819 C11orf74Q86VG3 221 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 KRT73Q86Y46 540 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 PPP1R2P1Q96PQ5 205 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 COQ7Q99807 217 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 SMARCAL1Q9NZC9 954 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 SLC25A13Q9UJS0 675 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 PCDHA4Q9UN74 947 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 PCDHA13Q9Y5I0 950 aa11.14□□□□□ -0.63
RTN3-206ENST00000377819 A0A1W2PQ27 194 aa11.13□□□□□ -0.63
RTN3-206ENST00000377819 A0A1W2PQ64 194 aa11.13□□□□□ -0.63
RTN3-206ENST00000377819 A0A1W2PQD8 194 aa11.13□□□□□ -0.63
RTN3-206ENST00000377819 MLH1P40692 756 aa11.13□□□□□ -0.63
RTN3-206ENST00000377819 TGM3Q08188 693 aa11.13□□□□□ -0.63
RTN3-206ENST00000377819 TWF1Q12792 350 aa11.13□□□□□ -0.63
RTN3-206ENST00000377819 GPS1Q13098 491 aa11.13□□□□□ -0.63
RTN3-206ENST00000377819 COG2Q14746 738 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms