RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 ACAD10Q6JQN1 1059 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 ENOSF1Q7L5Y1 443 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 EIF1ADQ8N9N8 165 aaKnown RBP14.95□□□□□ -0.02
MSH5-202ENST00000375740 SEPT1Q8WYJ6 367 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 ZNF653Q96CK0 615 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 RPS6KC1Q96S38 1066 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 TRPC6Q9Y210 931 aa14.95□□□□□ -0.02
MSH5-202ENST00000375740 ZNFX1Q9P2E3 1918 aaKnown RBP14.94□□□□□ -0.02
MSH5-202ENST00000375740 MIF4GDA9UHW6 222 aaKnown RBP14.94□□□□□ -0.02
MSH5-202ENST00000375740 PPP1R12AO14974 1030 aaPredicted RBP14.94□□□□□ -0.02
MSH5-202ENST00000375740 TMOD1P28289 359 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 COPB2P35606 906 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 RFC5P40937 340 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 MARCKSL1P49006 195 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 CLNS1AP54105 237 aaKnown RBP14.94□□□□□ -0.02
MSH5-202ENST00000375740 POU5F1Q01860 360 aaKnown RBP14.94□□□□□ -0.02
MSH5-202ENST00000375740 DRP2Q13474 957 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 ACCSLQ4AC99 568 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 WDR44Q5JSH3 913 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 FAM160B1Q5W0V3 765 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 UBL4BQ8N7F7 174 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 ZNF564Q8TBZ8 553 aaPredicted RBP14.94□□□□□ -0.02
MSH5-202ENST00000375740 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.94□□□□□ -0.02
MSH5-202ENST00000375740 KCNN1Q92952 543 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 ZSWIM1Q9BR11 485 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 MSTO1Q9BUK6 570 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 ERVK-5Q9HDB9 667 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 ANKFY1Q9P2R3 1169 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 A6NNZ2 444 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 KIAA0391O15091 583 aaKnown RBP14.94□□□□□ -0.02
MSH5-202ENST00000375740 DAPK3O43293 454 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 PGK2P07205 417 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 TGFB3P10600 412 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 PEX5P50542 639 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 BIRC3Q13489 604 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 CAPSQ13938 189 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 TUBB8Q3ZCM7 444 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 SPOPLQ6IQ16 392 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 CPNE8Q86YQ8 564 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 OR2W6PQ8NHA6 318 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 NAP1L3Q99457 506 aaPredicted RBP14.94□□□□□ -0.02
MSH5-202ENST00000375740 NEUROG2Q9H2A3 272 aa14.94□□□□□ -0.02
MSH5-202ENST00000375740 RBAKQ9NYW8 714 aaPredicted RBP14.94□□□□□ -0.02
MSH5-202ENST00000375740 PAPPA2Q9BXP8 1791 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 A0A0B4J269 797 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 VNN1O95497 513 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 CLEC16AQ2KHT3 1053 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 TLDC1Q6P9B6 456 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 CCDC121Q6ZUS5 278 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 ERO1BQ86YB8 467 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 ATP6V1G3Q96LB4 118 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 TMEM134Q9H6X4 195 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 RNF181Q9P0P0 153 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 GTF3C4Q9UKN8 822 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 SOCS7O14512 581 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 ARIH2O95376 493 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 LDHAP00338 332 aaKnown RBP14.93□□□□□ -0.02
MSH5-202ENST00000375740 HSPA9P38646 679 aaKnown RBP14.93□□□□□ -0.02
MSH5-202ENST00000375740 PIK3CAP42336 1068 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 PTENP60484 403 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 Q3C1V9 767 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 SEZ6Q53EL9 994 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 METTL7BQ6UX53 244 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 SGSM3Q96HU1 749 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 FAM81BQ96LP2 452 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 TXNRD2Q9NNW7 524 aa14.93□□□□□ -0.02
MSH5-202ENST00000375740 SIP14410 1827 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 ADCY3O60266 1144 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 MAFO75444 373 aaPredicted RBP14.92□□□□□ -0.02
MSH5-202ENST00000375740 CLSTN1O94985 981 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 CCNHP51946 323 aaPredicted RBP14.92□□□□□ -0.02
MSH5-202ENST00000375740 SF3A3Q12874 501 aaKnown RBP eCLIP14.92□□□□□ -0.022e-6■■■□□ 19.1
MSH5-202ENST00000375740 EMC10Q5UCC4 262 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 MORC4Q8TE76 937 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 PRPF31Q8WWY3 499 aaKnown RBP14.92□□□□□ -0.02
MSH5-202ENST00000375740 CD101Q93033 1021 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 WNT8AQ9H1J5 351 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 UVRAGQ9P2Y5 699 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 RBPJLQ9UBG7 517 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 CNOT8Q9UFF9 292 aaKnown RBP14.92□□□□□ -0.02
MSH5-202ENST00000375740 GOLGA6L7A0A1B0GV03 622 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 TTLL13PA6NNM8 815 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 CXCL11O14625 94 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 HARSP12081 509 aaKnown RBP14.92□□□□□ -0.02
MSH5-202ENST00000375740 BRD2P25440 801 aaKnown RBP14.92□□□□□ -0.02
MSH5-202ENST00000375740 BYSLQ13895 437 aaKnown RBP14.92□□□□□ -0.02
MSH5-202ENST00000375740 TTLL12Q14166 644 aaPredicted RBP14.92□□□□□ -0.02
MSH5-202ENST00000375740 PLCB4Q15147 1175 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 ANKRD20A8PQ5CZ79 823 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 ANKRD13AQ8IZ07 590 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 TRIM51Q9BSJ1 452 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 DPH5Q9H2P9 285 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 AZI2Q9H6S1 392 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 UTP11Q9Y3A2 253 aaKnown RBP14.92□□□□□ -0.02
MSH5-202ENST00000375740 ADGRA2Q96PE1 1338 aa14.92□□□□□ -0.02
MSH5-202ENST00000375740 GOLGA6L10A0A0M3HER8 536 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 SLC25A27O95847 323 aa14.91□□□□□ -0.02
MSH5-202ENST00000375740 UNGP13051 313 aaPredicted RBP14.91□□□□□ -0.02
MSH5-202ENST00000375740 MARK3P27448 753 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms