RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 HOXB7P09629 217 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 FAM153BP0C7A2 387 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 ESRRAP11474 423 aaPredicted RBP9.63□□□□□ -0.87
UBR4-201ENST00000375218 VAV1P15498 845 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 PSMD7P51665 324 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 ST3GAL1Q11201 340 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 ITGB3BPQ13352 177 aaPredicted RBP9.63□□□□□ -0.87
UBR4-201ENST00000375218 MAP3K11Q16584 847 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 HADHQ16836 314 aaKnown RBP9.63□□□□□ -0.87
UBR4-201ENST00000375218 TMEM266Q2M3C6 531 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 TMTC4Q5T4D3 741 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 OTUD7BQ6GQQ9 843 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 USP51Q70EK9 711 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 PPP1R35Q8TAP8 253 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 URGCPQ8TCY9 931 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 RASGRP4Q8TDF6 673 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 SEPT1Q8WYJ6 367 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 PAIP2BQ9ULR5 123 aaKnown RBP9.63□□□□□ -0.87
UBR4-201ENST00000375218 IRS2Q9Y4H2 1338 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 MYH13Q9UKX3 1938 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 B4E171 279 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 FRS3O43559 492 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 CASTP20810 708 aaKnown RBP9.63□□□□□ -0.87
UBR4-201ENST00000375218 ARHGDIBP52566 201 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 CUL1Q13616 776 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 PCBP2Q15366 365 aaKnown RBP eCLIP9.63□□□□□ -0.87
UBR4-201ENST00000375218 ZNF321PQ8N8H1 164 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 ZNF565Q8N9K5 539 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 HSPH1Q92598 858 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 ZSCAN31Q96LW9 406 aaPredicted RBP9.63□□□□□ -0.87
UBR4-201ENST00000375218 ADAM19Q9H013 955 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 KIF9Q9HAQ2 790 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 SESN1Q9Y6P5 492 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 QSER1Q2KHR3 1735 aa9.63□□□□□ -0.87
UBR4-201ENST00000375218 NCF1BA6NI72 391 aaPredicted RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 NCF1CA8MVU1 366 aaPredicted RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 SOCS7O14512 581 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 ZPR1O75312 459 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 GLAP06280 429 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 ACAT1P24752 427 aaKnown RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 RPL13P26373 211 aaKnown RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 PRKAR1BP31321 381 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 MAP7Q14244 749 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 CFAP100Q494V2 611 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 CEP55Q53EZ4 464 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 KRBOX4Q5JUW0 171 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 PKN3Q6P5Z2 889 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 VTA1Q9NP79 307 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 AGO2Q9UKV8 859 aaKnown RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 PALD1Q9ULE6 856 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 MAGED2Q9UNF1 606 aaPredicted RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 LRRC14BA6NHZ5 514 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 KRT14P02533 472 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 CKMT1AP12532 417 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 XRCC6P12956 609 aaKnown RBP eCLIP9.62□□□□□ -0.879e-7■□□□□ 8.9
UBR4-201ENST00000375218 EIF2S2P20042 333 aaKnown RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 FAM47CQ5HY64 1035 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 SYDE2Q5VT97 1194 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 KCTD6Q8NC69 237 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 EAF1Q96JC9 268 aaPredicted RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 BCL7BQ9BQE9 202 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 STMN4Q9H169 189 aaPredicted RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 ARFGAP3Q9NP61 516 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 PCDHGA1Q9Y5H4 931 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 SIPA1L1O43166 1804 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 DDX3YO15523 660 aaKnown RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 APEHP13798 732 aaKnown RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 IL2RBP14784 551 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 CSF2RAP15509 400 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 VCPP55072 806 aaKnown RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 COG7P83436 770 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 RASGRF1Q13972 1273 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 TMEM67Q5HYA8 995 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 COPS6Q7L5N1 327 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 ZSCAN1Q8NBB4 408 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 FAM156AQ8NDB6 213 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 XAGE3Q8WTP9 111 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 INPP5DQ92835 1189 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 WDR12Q9GZL7 423 aaKnown RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 MRPL40Q9NQ50 206 aaKnown RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 GLRX2Q9NS18 164 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 VPS28Q9UK41 221 aa9.62□□□□□ -0.87
UBR4-201ENST00000375218 RTCBQ9Y3I0 505 aaKnown RBP9.62□□□□□ -0.87
UBR4-201ENST00000375218 E2F8A0AVK6 867 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 RFPL1O75677 317 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 S100A9P06702 114 aaKnown RBP9.61□□□□□ -0.87
UBR4-201ENST00000375218 MCM5P33992 734 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 PTPN12Q05209 780 aaKnown RBP9.61□□□□□ -0.87
UBR4-201ENST00000375218 DOC2AQ14183 400 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 C1orf53Q5VUE5 145 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 ARL5BQ96KC2 179 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 KCNK17Q96T54 332 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 MROH8Q9H579 483 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 AGPAT3Q9NRZ7 376 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 RGL1Q9NZL6 768 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 TBC1D14Q9P2M4 693 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 DNM3Q9UQ16 869 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 SZT2Q5T011 3432 aa9.61□□□□□ -0.87
UBR4-201ENST00000375218 USP42Q9H9J4 1324 aaKnown RBP9.61□□□□□ -0.87
UBR4-201ENST00000375218 MAGEB3O15480 346 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms