RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 DDX27Q96GQ7 796 aaKnown RBP20.62■□□□□ 0.89
TGFBR1-201ENST00000374990 ZSWIM1Q9BR11 485 aa20.62■□□□□ 0.89
TGFBR1-201ENST00000374990 DMGDHQ9UI17 866 aaKnown RBP20.62■□□□□ 0.89
TGFBR1-201ENST00000374990 TRIM33Q9UPN9 1127 aa20.62■□□□□ 0.89
TGFBR1-201ENST00000374990 AGAP1Q9UPQ3 857 aa20.62■□□□□ 0.89
TGFBR1-201ENST00000374990 TNS2Q63HR2 1409 aa20.62■□□□□ 0.89
TGFBR1-201ENST00000374990 SPATS2LQ9NUQ6 558 aaKnown RBP20.62■□□□□ 0.89
TGFBR1-201ENST00000374990 FAM47DPA6NHR8 397 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 GAS2O43903 313 aaKnown RBP20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 PARP9Q8IXQ6 854 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 ACTRT1Q8TDG2 376 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 GOLPH3Q9H4A6 298 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 TMX2Q9Y320 296 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 ARHGAP23Q9P227 1491 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 TYK2P29597 1187 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 IL18RAPO95256 599 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 TRIM4Q9C037 500 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 PPP1R12AO14974 1030 aaPredicted RBP20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 CFLARO15519 480 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 OCRLQ01968 901 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 C4orf50Q6ZRC1 276 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 TRIM67Q6ZTA4 783 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 ZNF668Q96K58 619 aaPredicted RBP20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 CELF4Q9BZC1 486 aaKnown RBP20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 RAB21Q9UL25 225 aa20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 G3BP2Q9UN86 482 aaKnown RBP20.61■□□□□ 0.89
TGFBR1-201ENST00000374990 COILP38432 576 aaPredicted RBP20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 FRMD8Q9BZ67 464 aaPredicted RBP20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 PRMT7Q9NVM4 692 aaPredicted RBP20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 RSPH10B2B2RC85 870 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 RSPH10BP0C881 870 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 CAP2P40123 477 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 ARHGEF26Q96DR7 871 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 TMEM39BQ9GZU3 492 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 PSMC3IPQ9P2W1 217 aaPredicted RBP20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 TRAF3IP3Q9Y228 551 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 GTF2H1P32780 548 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 KYNUQ16719 465 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 ACAD10Q6JQN1 1059 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 OR2W6PQ8NHA6 318 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 FSD1LQ9BXM9 530 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 THAP2Q9H0W7 228 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 AIPL1Q9NZN9 384 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 H0Y3Z8 333 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 AKAP3O75969 853 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 EPHB1P54762 984 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 GRAMD1BQ3KR37 738 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 ZNF720Q7Z2F6 126 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 MYLK4Q86YV6 388 aaPredicted RBP20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 C2orf69Q8N8R5 385 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 KIAA0895Q8NCT3 520 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 C3orf20Q8ND61 904 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 FEZF2Q8TBJ5 459 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 SKA2Q8WVK7 121 aaPredicted RBP20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 RSAD1Q9HA92 442 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 MRPL40Q9NQ50 206 aaKnown RBP20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 FBXO28Q9NVF7 368 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 CREB3O43889 395 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 KCNJ1P48048 391 aa20.6■□□□□ 0.89
TGFBR1-201ENST00000374990 FRMD3A2A2Y4 597 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 ZBTB7AO95365 584 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 SLC25A27O95847 323 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 HSD17B3P37058 310 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 TARS2Q9BW92 718 aaKnown RBP20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 UNC45AQ9H3U1 944 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 ECT2Q9H8V3 914 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 AP3B1O00203 1094 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 SLC29A2Q14542 456 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 KRT80Q6KB66 452 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 ZFATQ9P243 1243 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 GARTP22102 1010 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 CASP4P49662 377 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 GJB7Q6PEY0 223 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 ACER1Q8TDN7 264 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 COL5A2P05997 1499 aaPredicted RBP20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 PID1Q7Z2X4 250 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 ZC3H15Q8WU90 426 aaKnown RBP20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 ATG4CQ96DT6 458 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 BTBD6Q96KE9 485 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 MCEEQ96PE7 176 aa20.59■□□□□ 0.89
TGFBR1-201ENST00000374990 MAGEA4P43358 317 aa20.58■□□□□ 0.89
TGFBR1-201ENST00000374990 KDM7AQ6ZMT4 941 aa20.58■□□□□ 0.89
TGFBR1-201ENST00000374990 PDZD8Q8NEN9 1154 aa20.58■□□□□ 0.89
TGFBR1-201ENST00000374990 TMC2Q8TDI7 906 aa20.58■□□□□ 0.89
TGFBR1-201ENST00000374990 FIS1Q9Y3D6 152 aa20.58■□□□□ 0.89
TGFBR1-201ENST00000374990 RBP3P10745 1247 aa20.58■□□□□ 0.89
TGFBR1-201ENST00000374990 PRMT1Q99873 361 aaKnown RBP20.58■□□□□ 0.89
TGFBR1-201ENST00000374990 MYL3P08590 195 aa20.58■□□□□ 0.89
TGFBR1-201ENST00000374990 XPAP23025 273 aaPredicted RBP20.58■□□□□ 0.89
TGFBR1-201ENST00000374990 LONRF1Q17RB8 773 aa20.58■□□□□ 0.89
TGFBR1-201ENST00000374990 TAAR1Q96RJ0 339 aa20.58■□□□□ 0.89
TGFBR1-201ENST00000374990 DUSP9Q99956 384 aaKnown RBP20.58■□□□□ 0.89
TGFBR1-201ENST00000374990 CACYBPQ9HB71 228 aaKnown RBP20.58■□□□□ 0.89
TGFBR1-201ENST00000374990 PTGISQ16647 500 aa20.58■□□□□ 0.88
TGFBR1-201ENST00000374990 C1orf228Q6PIY5 440 aa20.58■□□□□ 0.88
TGFBR1-201ENST00000374990 SEC16BQ96JE7 1060 aa20.58■□□□□ 0.88
TGFBR1-201ENST00000374990 PRMT6Q96LA8 375 aaPredicted RBP20.58■□□□□ 0.88
TGFBR1-201ENST00000374990 RAB6BQ9NRW1 208 aa20.58■□□□□ 0.88
TGFBR1-201ENST00000374990 PMS1P54277 932 aaKnown RBP20.58■□□□□ 0.88
TGFBR1-201ENST00000374990 TMEM132DQ14C87 1099 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms