RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 SLC22A17Q8WUG5 538 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TCP11Q8WWU5 503 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 MRFAP1L1Q96HT8 127 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ACCSQ96QU6 501 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 VN1R3Q9BXE9 311 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 GBP3Q9H0R5 595 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 KCTD10Q9H3F6 313 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TBC1D13Q9NVG8 400 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 DNAJB4Q9UDY4 337 aa11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 LIMA1Q9UHB6 759 aaKnown RBP11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PIN4Q9Y237 131 aaKnown RBP11.92□□□□□ -0.5
HLA-DQA1-202ENST00000374949 A0A087WZ62 844 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 KCNJ18B7U540 433 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 K7ENM7 598 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SLC16A4O15374 487 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 GAS2O43903 313 aaKnown RBP11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TPM3P06753 285 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CTSAP10619 480 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SCP2P22307 547 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SFPQP23246 707 aaKnown RBP eCLIP11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 EEF1GP26641 437 aaKnown RBP11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CDC25BP30305 580 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ABCD1P33897 745 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 HOXD13P35453 343 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 NPTX2P47972 431 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SLC11A1P49279 550 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 NCKAP1LP55160 1127 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 GTF2BQ00403 316 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 FKBP3Q00688 224 aaKnown RBP11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 DMP1Q13316 513 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 KCNJ12Q14500 433 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 BMS1Q14692 1282 aaKnown RBP11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PPP2R5AQ15172 486 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PTPN14Q15678 1187 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 EDRF1Q3B7T1 1238 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 FILIP1LQ4L180 1135 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ZCWPW2Q504Y3 356 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ATAT1Q5SQI0 421 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 GLB1LQ6UWU2 654 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 HAUS6Q7Z4H7 955 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 FILIP1Q7Z7B0 1213 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 DDX53Q86TM3 631 aaKnown RBP11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 IRF2BP1Q8IU81 584 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CREBRFQ8IUR6 639 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 DRC7Q8IY82 874 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ZNF710Q8N1W2 664 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TMEM143Q96AN5 459 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 HVCN1Q96D96 273 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 IGSF21Q96ID5 467 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CEP63Q96MT8 703 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 FDXACB1Q9BRP7 624 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 GCOM2Q9BZD3 368 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 XPO4Q9C0E2 1151 aaKnown RBP11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 POLR3FQ9H1D9 316 aaPredicted RBP11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 NRDE2Q9H7Z3 1164 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TMEM206Q9H813 350 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 KMT5AQ9NQR1 393 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TRAF3IP3Q9Y228 551 aa11.91□□□□□ -0.5
HLA-DQA1-202ENST00000374949 IGKV6-21A0A0C4DH24 114 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CETN3O15182 167 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 PPP1R37O75864 691 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 GNA14O95837 355 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 GALTP07902 379 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 TPM2P07951 284 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 RPL13P26373 211 aaKnown RBP11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 DNM2P50570 870 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 RNASELQ05823 741 aaKnown RBP11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ADAM9Q13443 819 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 NR1I3Q14994 352 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 NOMO2Q5JPE7 1267 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CCDC149Q6ZUS6 474 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SYCP3Q8IZU3 236 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 GOLGA5Q8TBA6 731 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 NLRP4Q96MN2 994 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 NAP1L5Q96NT1 182 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 SFXN1Q9H9B4 322 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CHST12Q9NRB3 414 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 FAM105AQ9NUU6 356 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CGNQ9P2M7 1197 aaKnown RBP11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 EXOC7Q9UPT5 735 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 USTQ9Y2C2 406 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 IRAK3Q9Y616 596 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 CACNA1AO00555 2505 aa11.9□□□□□ -0.5
HLA-DQA1-202ENST00000374949 ARID2Q68CP9 1835 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ASAP2O43150 1006 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 TGFB1I1O43294 461 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 GLRA2P23416 452 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 COPB1P53618 953 aaKnown RBP11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 SNRPFP62306 86 aaKnown RBP11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 KCNA1Q09470 495 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 MXD4Q14582 209 aaPredicted RBP11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 KRT31Q15323 416 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 NFIL3Q16649 462 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 HS2ST1Q7LGA3 356 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 CATSPER4Q7RTX7 472 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 GPR149Q86SP6 731 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 ZNF280BQ86YH2 543 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 RHPN2Q8IUC4 686 aa11.89□□□□□ -0.51
HLA-DQA1-202ENST00000374949 KSR1Q8IVT5 923 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms