RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 MAGEB5Q9BZ81 275 aa12.95□□□□□ -0.34
NPLOC4-202ENST00000374747 IL10P22301 178 aa12.95□□□□□ -0.34
NPLOC4-202ENST00000374747 FGFR4P22455 802 aa12.95□□□□□ -0.34
NPLOC4-202ENST00000374747 VAMP7P51809 220 aa12.95□□□□□ -0.34
NPLOC4-202ENST00000374747 ROR1Q01973 937 aa12.95□□□□□ -0.34
NPLOC4-202ENST00000374747 DPYDQ12882 1025 aa12.95□□□□□ -0.34
NPLOC4-202ENST00000374747 MTF1Q14872 753 aa12.95□□□□□ -0.34
NPLOC4-202ENST00000374747 IMPG1Q17R60 797 aa12.95□□□□□ -0.34
NPLOC4-202ENST00000374747 HEATR6Q6AI08 1181 aaKnown RBP12.95□□□□□ -0.34
NPLOC4-202ENST00000374747 ELOA2Q8IYF1 753 aaPredicted RBP12.95□□□□□ -0.34
NPLOC4-202ENST00000374747 SPATA33Q96N06 139 aa12.95□□□□□ -0.34
NPLOC4-202ENST00000374747 FAM49AQ9H0Q0 323 aaPredicted RBP12.95□□□□□ -0.34
NPLOC4-202ENST00000374747 KCND2Q9NZV8 630 aa12.95□□□□□ -0.34
NPLOC4-202ENST00000374747 MYL3P08590 195 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 ELF1P32519 619 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 SERPINB10P48595 397 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 FKBP1AP62942 108 aaKnown RBP12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 KRT17Q04695 432 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 ZNF699Q32M78 642 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 RFX8Q6ZV50 586 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 COG4Q9H9E3 785 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 LIMA1Q9UHB6 759 aaKnown RBP12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 TUBE1Q9UJT0 475 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 SMG5Q9UPR3 1016 aaKnown RBP12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 MRC1P22897 1456 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 NR3C2P08235 984 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 RAP1GDS1P52306 607 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 POU5F1BQ06416 359 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 MED21Q13503 144 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 ZC3H12BQ5HYM0 836 aaKnown RBP12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 SLC30A9Q6PML9 568 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 THNSL1Q8IYQ7 743 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 TMCO5AQ8N6Q1 288 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 MAFGO15525 162 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 SLC25A27O95847 323 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 SDC4P31431 198 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 CIITAP33076 1130 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 CCZ1BP86790 482 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 CCZ1P86791 482 aaPredicted RBP12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 E4F1Q66K89 784 aaPredicted RBP12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 LRRC8EQ6NSJ5 796 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 CDKL3Q8IVW4 592 aaPredicted RBP12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 THAP11Q96EK4 314 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 RMDN2Q96LZ7 410 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 RIT2Q99578 217 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 POLR3FQ9H1D9 316 aaPredicted RBP12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 TRABDQ9H4I3 376 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 PALMDQ9NP74 551 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 RGL1Q9NZL6 768 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 USP15Q9Y4E8 981 aaPredicted RBP12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 PIK3R2O00459 728 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 PDXKO00764 312 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 TYK2P29597 1187 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 YWHABP31946 246 aaKnown RBP12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 TRPC1P48995 793 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 CNGA3Q16281 694 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 ZNF746Q6NUN9 644 aaPredicted RBP12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 GLYCTKQ8IVS8 523 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 ANKRD13AQ8IZ07 590 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 CHST13Q8NET6 341 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 C1orf54Q8WWF1 131 aa12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 DDX28Q9NUL7 540 aaKnown RBP12.94□□□□□ -0.34
NPLOC4-202ENST00000374747 RHOBTB3O94955 611 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 PYGLP06737 847 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 CXCL9Q07325 125 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 TRIM72Q6ZMU5 477 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 NDUFAF2Q8N183 169 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 TEX9Q8N6V9 391 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 ULK4Q96C45 1275 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 CXorf56Q9H5V9 222 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 BFARQ9NZS9 450 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 ZNF229Q9UJW7 825 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 PITPNM2Q9BZ72 1349 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 LOC102724159A0A0B4J2E5 919 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 DAB1O75553 588 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 CHN1P15882 459 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 PWP2Q15269 919 aaKnown RBP12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 DNAL1Q4LDG9 190 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 SYDE1Q6ZW31 735 aaPredicted RBP12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 KIAA2013Q8IYS2 634 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 SH2D3CQ8N5H7 860 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 ANKRD7Q92527 254 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 GMCL1Q96IK5 515 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 DEAF1O75398 565 aaPredicted RBP12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 NFKBIAP25963 317 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 CYTH1Q15438 398 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 XKR3Q5GH77 459 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 DSTYKQ6XUX3 929 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 ENOSF1Q7L5Y1 443 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 FAM83AQ86UY5 434 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 PAWRQ96IZ0 340 aaKnown RBP12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 PPP1R16BQ96T49 567 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 HACD3Q9P035 362 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 PCSK1NQ9UHG2 260 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 TRIM66O15016 1216 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 GNA15P30679 374 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 HADHAP40939 763 aa12.93□□□□□ -0.34
NPLOC4-202ENST00000374747 BCAR1P56945 870 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms