RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 TMEM189-UBE2V1I3L0A0 370 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 IKBKBO14920 756 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 FGFR1OPO95684 399 aaKnown RBP12.3□□□□□ -0.44
HSPG2-202ENST00000374676 EFEMP2O95967 443 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 ITGB1P05556 798 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 EPB41P11171 864 aaKnown RBP12.3□□□□□ -0.44
HSPG2-202ENST00000374676 PBX3P40426 434 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 CLCNKBP51801 687 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 AP3M2P53677 418 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 TFAMQ00059 246 aaKnown RBP12.3□□□□□ -0.44
HSPG2-202ENST00000374676 KRT17Q04695 432 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 UBE3AQ05086 875 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 TYRO3Q06418 890 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 GPM6BQ13491 265 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 DUOXA2Q1HG44 320 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 CSGALNACT2Q8N6G5 542 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 PLEKHO2Q8TD55 490 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 CCDC127Q96BQ5 260 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 TMEM169Q96HH4 297 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 FNBP1Q96RU3 617 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 CGRRF1Q99675 332 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 PAAF1Q9BRP4 392 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 SRRTQ9BXP5 876 aaKnown RBP12.3□□□□□ -0.44
HSPG2-202ENST00000374676 LMAN2LQ9H0V9 348 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 CERS4Q9HA82 394 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 GOLGA2P5Q9HBQ8 144 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 METTL14Q9HCE5 456 aaKnown RBP12.3□□□□□ -0.44
HSPG2-202ENST00000374676 MARCH5Q9NX47 278 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 DPP3Q9NY33 737 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 STK39Q9UEW8 545 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 TUBGCP4Q9UGJ1 667 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 MTUS1Q9ULD2 1270 aa12.3□□□□□ -0.44
HSPG2-202ENST00000374676 PRG3Q9Y2Y8 225 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-202ENST00000374676 SZT2Q5T011 3432 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 ANO9A1A5B4 782 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 EPOPA6NHQ4 379 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 PODXLO00592 558 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 PIRO00625 290 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 LPXNO60711 386 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 FGF18O76093 207 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 GNA14O95837 355 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 CCDC192P0DO97 292 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 DLATP10515 647 aaKnown RBP12.29□□□□□ -0.44
HSPG2-202ENST00000374676 KRT13P13646 458 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 TNNI1P19237 187 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 PAX3P23760 479 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 BFSP1Q12934 665 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 GRIN2CQ14957 1233 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 CD300LGQ6UXG3 332 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 FRMD5Q7Z6J6 570 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 DDX53Q86TM3 631 aaKnown RBP12.29□□□□□ -0.44
HSPG2-202ENST00000374676 TMEM173Q86WV6 379 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-202ENST00000374676 ENOX1Q8TC92 643 aaKnown RBP12.29□□□□□ -0.44
HSPG2-202ENST00000374676 EEF2KMTQ96G04 330 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 ANKRD36BP1Q96IX9 119 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 FUCA2Q9BTY2 467 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 LMCD1Q9NZU5 365 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 PUF60Q9UHX1 559 aaKnown RBP12.29□□□□□ -0.44
HSPG2-202ENST00000374676 ADAM28Q9UKQ2 775 aa12.29□□□□□ -0.44
HSPG2-202ENST00000374676 SYCE3A1L190 88 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 LRRIQ3A6PVS8 624 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-202ENST00000374676 TADA2AO75478 443 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 B3GAT3O94766 335 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 TNNC2P02585 160 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 TMEM191BP0C7N4 346 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 POU3F3P20264 500 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-202ENST00000374676 VAMP7P51809 220 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 GUCY2FP51841 1108 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 MARSP56192 900 aaKnown RBP12.28□□□□□ -0.44
HSPG2-202ENST00000374676 RBP5P82980 135 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 ELAVL2Q12926 359 aaKnown RBP12.28□□□□□ -0.44
HSPG2-202ENST00000374676 ZSCAN23Q3MJ62 389 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 C1orf220Q5T0J3 134 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 C9orf57Q5W0N0 161 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 TRAPPC11Q7Z392 1133 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 RNF168Q8IYW5 571 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-202ENST00000374676 C1orf127Q8N9H9 656 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 OR5B17Q8NGF7 314 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 CXorf38Q8TB03 319 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 BCL7CQ8WUZ0 217 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-202ENST00000374676 ZNF516Q92618 1163 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 POP1Q99575 1024 aaKnown RBP12.28□□□□□ -0.44
HSPG2-202ENST00000374676 ALG13Q9NP73 1137 aaKnown RBP12.28□□□□□ -0.44
HSPG2-202ENST00000374676 CACNG4Q9UBN1 327 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 ARMCX3Q9UH62 379 aaPredicted RBP12.28□□□□□ -0.44
HSPG2-202ENST00000374676 ITGA11Q9UKX5 1188 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 PTPRJQ12913 1337 aa12.28□□□□□ -0.44
HSPG2-202ENST00000374676 F8W810 466 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 RFXAPO00287 272 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 GRM6O15303 877 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 TRAPPC3O43617 180 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 STX10O60499 249 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 KIF4AO95239 1232 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 C4BPAP04003 597 aaKnown RBP12.27□□□□□ -0.45
HSPG2-202ENST00000374676 SOD2P04179 222 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 GTF2H1P32780 548 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 DLG4P78352 724 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 CAMK1Q14012 370 aa12.27□□□□□ -0.45
HSPG2-202ENST00000374676 TPD52L1Q16890 204 aaPredicted RBP12.27□□□□□ -0.45
HSPG2-202ENST00000374676 CCDC40Q4G0X9 1142 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms