RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 RAB44Q7Z6P3 723 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-204ENST00000373560 PIP4P1Q86T03 277 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 ZSCAN18Q8TBC5 510 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-204ENST00000373560 DEPDC1BQ8WUY9 529 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 LRRC3BQ96PB8 259 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 MAP3K14Q99558 947 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 DISC1Q9NRI5 854 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 TBC1D22BQ9NU19 505 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 TCEAL9Q9UHQ7 104 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 VPS9D1Q9Y2B5 631 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 CDY1Q9Y6F8 540 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 ACACAQ13085 2346 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 PTPRBP23467 1997 aa13.69□□□□□ -0.22
HDAC8-204ENST00000373560 ASXL3Q9C0F0 2248 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 CNTNAP5Q8WYK1 1306 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 NUP210Q8TEM1 1887 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-204ENST00000373560 CCDC163A0A0D9SF12 145 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 TK2O00142 265 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 NR1I2O75469 434 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 NAPAP54920 295 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 UVSSAQ2YD98 709 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 CDR2LQ86X02 465 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-204ENST00000373560 TICAM2Q86XR7 235 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 SPNS2Q8IVW8 549 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 MFSD6LQ8IWD5 586 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 MB21D2Q8IYB1 491 aaPredicted RBP13.68□□□□□ -0.22
HDAC8-204ENST00000373560 CSGALNACT1Q8TDX6 532 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 NIFKQ9BYG3 293 aaKnown RBP13.68□□□□□ -0.22
HDAC8-204ENST00000373560 UNC45AQ9H3U1 944 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 UBN1Q9NPG3 1134 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 FSCN3Q9NQT6 498 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 MTRRQ9UBK8 725 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 RAI2Q9Y5P3 530 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 COL4A3BPQ9Y5P4 624 aa13.68□□□□□ -0.22
HDAC8-204ENST00000373560 PTPRDP23468 1912 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 E7EWF7 191 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 PYCARD-AS1I3L0S3 204 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 KHNYNO15037 678 aaKnown RBP13.67□□□□□ -0.22
HDAC8-204ENST00000373560 TSPAN1O60635 241 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 SRGAP2CP0DJJ0 459 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 PTPN2P17706 415 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 BCKDHBP21953 392 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 MAPK8P45983 427 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 TNK2Q07912 1038 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 GRIK3Q13003 919 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 TRDNQ13061 729 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 ELF2Q15723 593 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 PRR16Q569H4 304 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 TMTC3Q6ZXV5 915 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 CHFRQ96EP1 664 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 LZTS2Q9BRK4 669 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 CCDC86Q9H6F5 360 aaKnown RBP13.67□□□□□ -0.22
HDAC8-204ENST00000373560 PLSCR2Q9NRY7 297 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 DIAPH3Q9NSV4 1193 aa13.67□□□□□ -0.22
HDAC8-204ENST00000373560 CCDC194A0A1B0GVG4 234 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 ARHGEF37A1IGU5 675 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 EDIL3O43854 480 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 MAFO75444 373 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-204ENST00000373560 SEC24AO95486 1093 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 FOSP01100 380 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-204ENST00000373560 CYP3A4P08684 503 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 MLLT6P55198 1093 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-204ENST00000373560 AP3B2Q13367 1082 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 TEAD2Q15562 447 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 STXBP5Q5T5C0 1151 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 PMS2CLQ68D20 193 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 FSTL4Q6MZW2 842 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 PLEKHM2Q8IWE5 1019 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 TMEM143Q96AN5 459 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 MSANTD3Q96H12 275 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 C8orf33Q9H7E9 229 aaPredicted RBP13.66□□□□□ -0.22
HDAC8-204ENST00000373560 TRPV4Q9HBA0 871 aa13.66□□□□□ -0.22
HDAC8-204ENST00000373560 RHOBTB1O94844 696 aa13.65□□□□□ -0.22
HDAC8-204ENST00000373560 CALM1P0DP23 149 aa13.65□□□□□ -0.22
HDAC8-204ENST00000373560 CALM2P0DP24 149 aa13.65□□□□□ -0.22
HDAC8-204ENST00000373560 CALM3P0DP25 149 aa13.65□□□□□ -0.22
HDAC8-204ENST00000373560 DNM2P50570 870 aa13.65□□□□□ -0.22
HDAC8-204ENST00000373560 CDC42EP1Q00587 391 aa13.65□□□□□ -0.22
HDAC8-204ENST00000373560 PTH1RQ03431 593 aa13.65□□□□□ -0.22
HDAC8-204ENST00000373560 NAIF1Q69YI7 327 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-204ENST00000373560 ANO5Q75V66 913 aa13.65□□□□□ -0.22
HDAC8-204ENST00000373560 PDZD4Q76G19 769 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-204ENST00000373560 RALGPS2Q86X27 583 aaPredicted RBP13.65□□□□□ -0.22
HDAC8-204ENST00000373560 CNNM3Q8NE01 707 aa13.65□□□□□ -0.22
HDAC8-204ENST00000373560 SLC4A5Q9BY07 1137 aa13.65□□□□□ -0.22
HDAC8-204ENST00000373560 SLC8A2Q9UPR5 921 aa13.65□□□□□ -0.22
HDAC8-204ENST00000373560 GIT1Q9Y2X7 761 aa13.65□□□□□ -0.22
HDAC8-204ENST00000373560 PCDH15Q96QU1 1955 aa13.65□□□□□ -0.22
HDAC8-204ENST00000373560 MUC22E2RYF6 1773 aaPredicted RBP13.64□□□□□ -0.23
HDAC8-204ENST00000373560 SMCO2A6NFE2 343 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 CCER2I3L3R5 266 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 I3L4J1 428 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 PTGESO14684 152 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 CHADO15335 359 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 MSH4O15457 936 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 B4GALT5O43286 388 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 LRG1P02750 347 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 PRKCBP05771 671 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 FGFR3P22607 806 aa13.64□□□□□ -0.23
HDAC8-204ENST00000373560 TKTP29401 623 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms