RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 HOXD8P13378 290 aaPredicted RBP20.99■□□□□ 0.95
HDAC1-201ENST00000373548 TNNC1P63316 161 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 SMC1AQ14683 1233 aaKnown RBP20.99■□□□□ 0.95
HDAC1-201ENST00000373548 TMEM132AQ24JP5 1023 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 MSL3Q8N5Y2 521 aaKnown RBP20.99■□□□□ 0.95
HDAC1-201ENST00000373548 NUP85Q9BW27 656 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 PRMT7Q9NVM4 692 aaPredicted RBP20.99■□□□□ 0.95
HDAC1-201ENST00000373548 CPA4Q9UI42 421 aa20.99■□□□□ 0.95
HDAC1-201ENST00000373548 A0A087WZ62 844 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 ADCY6O43306 1168 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 MMP3P08254 477 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 TMEM270Q6UE05 265 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 IFNLR1Q8IU57 520 aaPredicted RBP20.98■□□□□ 0.95
HDAC1-201ENST00000373548 AENQ8WTP8 325 aaKnown RBP20.98■□□□□ 0.95
HDAC1-201ENST00000373548 PPP1R16BQ96T49 567 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 FDXACB1Q9BRP7 624 aaPredicted RBP20.98■□□□□ 0.95
HDAC1-201ENST00000373548 TMEM110-MUSTN1A8MSY1 372 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 CSDE1O75534 798 aaKnown RBP20.98■□□□□ 0.95
HDAC1-201ENST00000373548 GLI1P08151 1106 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 HUNKP57058 714 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 OSTNP61366 133 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 FAM187BQ17R55 369 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 DUOXA2Q1HG44 320 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 MTHFD1LQ6UB35 978 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 KLHL7Q8IXQ5 586 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 EFCAB13Q8IY85 973 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 UBR7Q8N806 425 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 OR6J1Q8NGC5 347 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 ZNF564Q8TBZ8 553 aaPredicted RBP20.98■□□□□ 0.95
HDAC1-201ENST00000373548 ALG3Q92685 438 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 AP1M1Q9BXS5 423 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 IMPG2Q9BZV3 1241 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 TTC7AQ9ULT0 858 aaPredicted RBP20.98■□□□□ 0.95
HDAC1-201ENST00000373548 AKT3Q9Y243 479 aa20.98■□□□□ 0.95
HDAC1-201ENST00000373548 TRPM7Q96QT4 1865 aa20.97■□□□□ 0.95
HDAC1-201ENST00000373548 CLSTN1O94985 981 aa20.97■□□□□ 0.95
HDAC1-201ENST00000373548 VTNP04004 478 aa20.97■□□□□ 0.95
HDAC1-201ENST00000373548 TNFRSF8P28908 595 aa20.97■□□□□ 0.95
HDAC1-201ENST00000373548 MYL6P60660 151 aa20.97■□□□□ 0.95
HDAC1-201ENST00000373548 MESDQ14696 234 aa20.97■□□□□ 0.95
HDAC1-201ENST00000373548 AMHR2Q16671 573 aa20.97■□□□□ 0.95
HDAC1-201ENST00000373548 IQSEC1Q6DN90 963 aa20.97■□□□□ 0.95
HDAC1-201ENST00000373548 RBBP8NLQ8NC74 664 aaPredicted RBP20.97■□□□□ 0.95
HDAC1-201ENST00000373548 CARD9Q9H257 536 aa20.97■□□□□ 0.95
HDAC1-201ENST00000373548 UVRAGQ9P2Y5 699 aa20.97■□□□□ 0.95
HDAC1-201ENST00000373548 GPR25O00155 361 aa20.96■□□□□ 0.95
HDAC1-201ENST00000373548 CYP1A1P04798 512 aaPredicted RBP20.96■□□□□ 0.95
HDAC1-201ENST00000373548 TNNT3P45378 269 aaPredicted RBP20.96■□□□□ 0.95
HDAC1-201ENST00000373548 TFAMQ00059 246 aaKnown RBP20.96■□□□□ 0.95
HDAC1-201ENST00000373548 TMEM192Q8IY95 271 aa20.96■□□□□ 0.95
HDAC1-201ENST00000373548 RPS6KC1Q96S38 1066 aa20.96■□□□□ 0.95
HDAC1-201ENST00000373548 CNOT8Q9UFF9 292 aaKnown RBP20.96■□□□□ 0.95
HDAC1-201ENST00000373548 RAD51CO43502 376 aa20.96■□□□□ 0.95
HDAC1-201ENST00000373548 B4GALT4O60513 344 aa20.96■□□□□ 0.95
HDAC1-201ENST00000373548 ECM2O94769 699 aaPredicted RBP20.96■□□□□ 0.95
HDAC1-201ENST00000373548 HEXIM1O94992 359 aaKnown RBP20.96■□□□□ 0.95
HDAC1-201ENST00000373548 COMTP21964 271 aa20.96■□□□□ 0.95
HDAC1-201ENST00000373548 PPFIA1Q13136 1202 aa20.96■□□□□ 0.95
HDAC1-201ENST00000373548 MCOLN2Q8IZK6 566 aa20.96■□□□□ 0.95
HDAC1-201ENST00000373548 CPA5Q8WXQ8 436 aa20.96■□□□□ 0.95
HDAC1-201ENST00000373548 BTBD6Q96KE9 485 aa20.96■□□□□ 0.95
HDAC1-201ENST00000373548 GDAP1L1Q96MZ0 367 aa20.96■□□□□ 0.95
HDAC1-201ENST00000373548 PLEKHA4Q9H4M7 779 aa20.96■□□□□ 0.95
HDAC1-201ENST00000373548 GDF3Q9NR23 364 aa20.96■□□□□ 0.95
HDAC1-201ENST00000373548 ZSCAN5CA6NGD5 496 aaPredicted RBP20.95■□□□□ 0.94
HDAC1-201ENST00000373548 MIF4GDA9UHW6 222 aaKnown RBP20.95■□□□□ 0.94
HDAC1-201ENST00000373548 IGF2BP3O00425 579 aaKnown RBP eCLIP20.95■□□□□ 0.94
HDAC1-201ENST00000373548 KRIT1O00522 736 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 ITGBL1O95965 494 aaPredicted RBP20.95■□□□□ 0.94
HDAC1-201ENST00000373548 CFHP08603 1231 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 ITGA4P13612 1032 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 TMOD1P28289 359 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 GNA15P30679 374 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 GRIK4Q16099 956 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 MORN1Q5T089 497 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 MARCH8Q5T0T0 291 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 NAA35Q5VZE5 725 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 KRT35Q92764 455 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 RNPC3Q96LT9 517 aaKnown RBP20.95■□□□□ 0.94
HDAC1-201ENST00000373548 NMRK2Q9NPI5 230 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 CCDC188H7C350 402 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 FGGP02679 453 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 TMEM191BP0C7N4 346 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 CXCL8P10145 99 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 OAS2P29728 719 aaKnown RBP20.95■□□□□ 0.94
HDAC1-201ENST00000373548 MARCKSL1P49006 195 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 ZNF132P52740 706 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 CENPCQ03188 943 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 DGKDQ16760 1214 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 SGSM1Q2NKQ1 1148 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 CYFIP2Q96F07 1278 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 ZSWIM1Q9BR11 485 aa20.95■□□□□ 0.94
HDAC1-201ENST00000373548 RPF1Q9H9Y2 349 aaKnown RBP20.95■□□□□ 0.94
HDAC1-201ENST00000373548 H3BQF6 201 aa20.94■□□□□ 0.94
HDAC1-201ENST00000373548 GUCY2DQ02846 1103 aa20.94■□□□□ 0.94
HDAC1-201ENST00000373548 CPNE8Q86YQ8 564 aa20.94■□□□□ 0.94
HDAC1-201ENST00000373548 RASAL3Q86YV0 1011 aa20.94■□□□□ 0.94
HDAC1-201ENST00000373548 IFT20Q8IY31 132 aa20.94■□□□□ 0.94
HDAC1-201ENST00000373548 CD101Q93033 1021 aa20.94■□□□□ 0.94
HDAC1-201ENST00000373548 NIF3L1Q9GZT8 377 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms