RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 KATNAL1Q9BW62 490 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 TRPC7Q9HCX4 862 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 SERPIND1P05546 499 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 CCDC159P0C7I6 412 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 S100A5P33763 92 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 CACNB2Q08289 660 aaPredicted RBP12.12□□□□□ -0.47
VCL-202ENST00000372755 SMAD1Q15797 465 aaKnown RBP12.12□□□□□ -0.47
VCL-202ENST00000372755 WDR72Q3MJ13 1102 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 PLD3Q8IV08 490 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 DHX40Q8IX18 779 aaKnown RBP12.12□□□□□ -0.47
VCL-202ENST00000372755 KCNK16Q96T55 309 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 STK33Q9BYT3 514 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 PRDM5Q9NQX1 630 aaPredicted RBP12.12□□□□□ -0.47
VCL-202ENST00000372755 HSPBP1Q9NZL4 362 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 AGAP1Q9UPQ3 857 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 KDM1AO60341 852 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 DGAT1O75907 488 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 SEC24DO94855 1032 aaPredicted RBP12.12□□□□□ -0.47
VCL-202ENST00000372755 ENO1P06733 434 aaKnown RBP12.12□□□□□ -0.47
VCL-202ENST00000372755 RFWD2Q8NHY2 731 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 PLEKHA8Q96JA3 519 aa12.12□□□□□ -0.47
VCL-202ENST00000372755 MTIF3Q9H2K0 278 aaKnown RBP12.12□□□□□ -0.47
VCL-202ENST00000372755 PSMC3IPQ9P2W1 217 aaPredicted RBP12.12□□□□□ -0.47
VCL-202ENST00000372755 UGGT1Q9NYU2 1555 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 SMAPO00193 183 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 TEX33O43247 280 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 TXNP10599 105 aaKnown RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 PMS1P54277 932 aaKnown RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 PIGHQ14442 188 aaPredicted RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 XKR3Q5GH77 459 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 PCYOX1LQ8NBM8 494 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 SCFD2Q8WU76 684 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 H2AFY2Q9P0M6 372 aaPredicted RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 ZC3H7BQ9UGR2 993 aaKnown RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 TTC37Q6PGP7 1564 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 RALBP11234 206 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 USP10Q14694 798 aaKnown RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 KIZQ2M2Z5 673 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 POTEAQ6S8J7 498 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 ADCK2Q7Z695 626 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 SPATA4Q8NEY3 305 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 ZNF507Q8TCN5 953 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 PRMT1Q99873 361 aaKnown RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 APEX2Q9UBZ4 518 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 AMACRQ9UHK6 382 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 PP2D1A8MPX8 630 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 EEF2KO00418 725 aaKnown RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 SPAG6O75602 509 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 CYTH1Q15438 398 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 SGSM1Q2NKQ1 1148 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 DEPDC1Q5TB30 811 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 EFL1Q7Z2Z2 1120 aaKnown RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 BBS7Q8IWZ6 715 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 ZFP42Q96MM3 310 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 SPATA16Q9BXB7 569 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 MPP6Q9NZW5 540 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 TCP11X1B4DZS4 312 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 PRR23D1E9PI22 279 aaPredicted RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 PRR23D2P0DMB1 279 aaPredicted RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 MYL2P10916 166 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 PDGFRAP16234 1089 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 NLRP11P59045 1033 aaKnown RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 MRPS15P82914 257 aaKnown RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 ARHGEF7Q14155 803 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 C6orf10Q5SRN2 563 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 CENPPQ6IPU0 288 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 KDELC2Q7Z4H8 507 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 TNIP2Q8NFZ5 429 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 FOXP3Q9BZS1 431 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 KCND2Q9NZV8 630 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 LIMA1Q9UHB6 759 aaKnown RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 AKAP10O43572 662 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 KDSRQ06136 332 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 ACTN3Q08043 901 aaPredicted RBP12.11□□□□□ -0.47
VCL-202ENST00000372755 TMEM132DQ14C87 1099 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 NBPF20Q3BBV1 942 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 COBLL1Q53SF7 1204 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 SGMS1Q86VZ5 419 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 AGGF1Q8N302 714 aaeCLIP12.11□□□□□ -0.47
VCL-202ENST00000372755 THAP11Q96EK4 314 aa12.11□□□□□ -0.47
VCL-202ENST00000372755 TADA2AO75478 443 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 KCNJ6P48051 423 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 YIPF2Q9BWQ6 316 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 CDYLQ9Y232 598 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 PKP3Q9Y446 797 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 PNPLA7Q6ZV29 1317 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 KLHL2O95198 593 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 CD4P01730 458 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 PSMA3P25788 255 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 CAPZA2P47755 286 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 RGS4P49798 205 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 NUP93Q8N1F7 819 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 CLEC4FQ8N1N0 589 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 STKLD1Q8NE28 680 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 SYTL2Q9HCH5 934 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 XPO7Q9UIA9 1087 aaKnown RBP12.1□□□□□ -0.47
VCL-202ENST00000372755 ANKRD65E5RJM6 399 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 VCAM1P19320 739 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 SSTR3P32745 418 aaPredicted RBP12.1□□□□□ -0.47
VCL-202ENST00000372755 ACADSBP45954 432 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms