RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 TRIM8Q9BZR9 551 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 ARNT2Q9HBZ2 717 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 PXMP2Q9NR77 195 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 DDX25Q9UHL0 483 aaKnown RBP3.98□□□□□ -1.77
MCF2-202ENST00000370573 ADGRE2Q9UHX3 823 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 CPA4Q9UI42 421 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 PLAGL2Q9UPG8 496 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 HPSEQ9Y251 543 aa3.98□□□□□ -1.77
MCF2-202ENST00000370573 LCTP09848 1927 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 ZNFX1Q9P2E3 1918 aaKnown RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 DNAJC25-GNG10A0A024R161 153 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 GOLGA6L4A6NEF3 574 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 PP2D1A8MPX8 630 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 ALG1L2C9J202 215 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 MSH4O15457 936 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 NEMFO60524 1076 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 MBD3O95983 291 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 PGK2P07205 417 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 ARP10275 920 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 PFKFB1P16118 471 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 GCFC2P16383 781 aaKnown RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 PMLP29590 882 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 CDC25AP30304 524 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 GRK4P32298 578 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 PRPHP41219 470 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 TXKP42681 527 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 GCLCP48506 637 aaPredicted RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 OXCT1P55809 520 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 INHBEP58166 350 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 PGM5Q15124 567 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 CALCRLQ16602 461 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 C4orf46Q504U0 113 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 CEP55Q53EZ4 464 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 PRR16Q569H4 304 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 CCSAPQ6IQ19 270 aaPredicted RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 CAVIN1Q6NZI2 390 aaKnown RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 VHLLQ6RSH7 139 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 C17orf99Q6UX52 265 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 CYFIP1Q7L576 1253 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 EEPD1Q7L9B9 569 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 ANKRD35Q8N283 1001 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 FAM133AQ8N9E0 248 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 SHCBP1Q8NEM2 672 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 ZNF507Q8TCN5 953 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 SMCR8Q8TEV9 937 aaPredicted RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 KLHL6Q8WZ60 621 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 MRPS27Q92552 414 aaKnown RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 ZNF669Q96BR6 464 aaPredicted RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 CAPNS2Q96L46 248 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 PARK7Q99497 189 aaKnown RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 MXRA8Q9BRK3 442 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 MMTAG2Q9BU76 263 aaKnown RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 MAF1Q9H063 256 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 MROH8Q9H579 483 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 ZCCHC17Q9NP64 241 aaKnown RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 KCNMB3Q9NPA1 279 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 DACT1Q9NYF0 836 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 FBXO40Q9UH90 709 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 UBIAD1Q9Y5Z9 338 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 LAD1O00515 517 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 SUSD5O60279 629 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 BPNT1O95861 308 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 CEACAM5P06731 702 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 CD8BP10966 210 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 MYCLP12524 364 aaPredicted RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 CCNFP41002 786 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 TECP42680 631 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 RPL6Q02878 288 aaKnown RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 SLBPQ14493 270 aaKnown RBP eCLIP3.97□□□□□ -1.77
MCF2-202ENST00000370573 PLCL1Q15111 1095 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 FAM110CQ1W6H9 321 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 ARHGEF16Q5VV41 709 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 UNC5AQ6ZN44 842 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 PLA2G4DQ86XP0 818 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 NSUN6Q8TEA1 469 aaKnown RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 LRRC15Q8TF66 581 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 SLC5A5Q92911 643 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 FBXL18Q96ME1 805 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 SMAD5Q99717 465 aaKnown RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 NAP1L4Q99733 375 aaKnown RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 WDR11Q9BZH6 1224 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 WNT10AQ9GZT5 417 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 BCAS3Q9H6U6 928 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 JADE2Q9NQC1 790 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 MCM8Q9UJA3 840 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 KCNH3Q9ULD8 1083 aa3.97□□□□□ -1.77
MCF2-202ENST00000370573 RBBP6Q7Z6E9 1792 aaKnown RBP3.97□□□□□ -1.77
MCF2-202ENST00000370573 PFASO15067 1338 aa3.96□□□□□ -1.77
MCF2-202ENST00000370573 MEIS3P2A8K0S8 358 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 TBX3O15119 743 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 TLR2O60603 784 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 ATP9AO75110 1047 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 RFPL3O75679 317 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 SLITRK5O94991 958 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 ZNF202O95125 648 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 EOMESO95936 686 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 LDHAP00338 332 aaKnown RBP3.96□□□□□ -1.78
MCF2-202ENST00000370573 FCER1AP12319 257 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 EDNRBP24530 442 aa3.96□□□□□ -1.78
MCF2-202ENST00000370573 CTGFP29279 349 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms