RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 MOV10L1Q9BXT6 1211 aaKnown RBP11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 VCX3BQ9H321 246 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 VCX3AQ9NNX9 186 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 TOPORSQ9NS56 1045 aaPredicted RBP11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 DDX18Q9NVP1 670 aaKnown RBP11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 CHMP2BQ9UQN3 213 aa11.04□□□□□ -0.64
PRPF38B-201ENST00000370021 MYO5AQ9Y4I1 1855 aaKnown RBP11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 KCPQ6ZWJ8 1503 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 AKAP11Q9UKA4 1901 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 C1orf167Q5SNV9 1468 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 CCDC22O60826 627 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 DNAJC6O75061 913 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 PEX11AO75192 247 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 KRT1P04264 644 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 MYCLP12524 364 aaPredicted RBP11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 GSTT1P30711 240 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 RPS6KA3P51812 740 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 ZNF543Q08ER8 600 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 MGAT5Q09328 741 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 FASTKD3Q14CZ7 662 aaKnown RBP11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 RHPN2Q8IUC4 686 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 SLF2Q8IX21 1173 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 ZDHHC14Q8IZN3 488 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 EIF1ADQ8N9N8 165 aaKnown RBP11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 CCDC110Q8TBZ0 833 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 MAIP1Q8WWC4 291 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 ZWILCHQ9H900 591 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 LARSQ9P2J5 1176 aaKnown RBP11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 ZNF711Q9Y462 761 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 O00370 1275 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 CES2O00748 559 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 MAP3K13O43283 966 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 MAP3K6O95382 1288 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 PTGIRP43119 386 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 MFAP3P55082 362 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 WDR4P57081 412 aaKnown RBP11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 PDE1CQ14123 709 aaPredicted RBP11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 SLC1A5Q15758 541 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 SGSM1Q2NKQ1 1148 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 TMCO4Q5TGY1 634 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 ARHGAP24Q8N264 748 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 RSAD2Q8WXG1 361 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 POMGNT1Q8WZA1 660 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 GRAMD1AQ96CP6 724 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 PPP1R36Q96LQ0 422 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 NT5C1BQ96P26 610 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 FAM111AQ96PZ2 611 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 FNBP1Q96RU3 617 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 AMNQ9BXJ7 453 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 AGPAT3Q9NRZ7 376 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 RAB20Q9NX57 234 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 STXBP5LQ9Y2K9 1186 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 ASTN1O14525 1302 aa11.03□□□□□ -0.64
PRPF38B-201ENST00000370021 IRF6O14896 467 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 TOM1L1O75674 476 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 CHRNB2P17787 502 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 PRKCIP41743 596 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 ROR2Q01974 943 aaKnown RBP11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 RASA3Q14644 834 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 CWF19L1Q69YN2 538 aaKnown RBP11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 INTS5Q6P9B9 1019 aaKnown RBP11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 LRRC74BQ6ZQY2 392 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 ARHGAP22Q7Z5H3 698 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 SDCCAG8Q86SQ7 713 aaPredicted RBP11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 NOP9Q86U38 636 aaKnown RBP11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 SMC1BQ8NDV3 1235 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 RFWD2Q8NHY2 731 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 EZH1Q92800 747 aaPredicted RBP11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 CFAP36Q96G28 342 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 TSSK1BQ9BXA7 367 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 LRRC4BQ9NT99 713 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 NDE1Q9NXR1 346 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 CLIC5Q9NZA1 410 aa11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 MAGED2Q9UNF1 606 aaPredicted RBP11.02□□□□□ -0.64
PRPF38B-201ENST00000370021 PPP1R11O60927 126 aaPredicted RBP11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 INHBAP08476 426 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 RAB27AP51159 221 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 SLC12A3P55017 1021 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 STAT4Q14765 748 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 RABGAP1LQ5R372 815 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 C3orf62Q6ZUJ4 267 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 ZNF577Q9BSK1 485 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 MAD1L1Q9Y6D9 718 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 A0A0A6YYK5 440 aaPredicted RBP11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 MEI4A8MW99 385 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 FAM86B1E9PN63 330 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 AHCYL1O43865 530 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 LPXNO60711 386 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 PGM3O95394 542 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 FAM86B2P0C5J1 330 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 GM2AP17900 193 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 PTPN4P29074 926 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 MAP7Q14244 749 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 PPP2R5DQ14738 602 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 TTC7BQ86TV6 843 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 ZSWIM2Q8NEG5 633 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 ART4Q93070 314 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 HIC2Q96JB3 615 aa11.02□□□□□ -0.65
PRPF38B-201ENST00000370021 PCDHB18PQ96TA0 734 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms