RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 FAAP100Q0VG06 881 aa18.65■□□□□ 0.58
UBE3D-203ENST00000369747 LRRC26Q2I0M4 334 aa18.65■□□□□ 0.58
UBE3D-203ENST00000369747 SEZ6Q53EL9 994 aa18.65■□□□□ 0.58
UBE3D-203ENST00000369747 C1orf53Q5VUE5 145 aa18.65■□□□□ 0.58
UBE3D-203ENST00000369747 FAM228AQ86W67 206 aa18.65■□□□□ 0.58
UBE3D-203ENST00000369747 PLEKHO2Q8TD55 490 aa18.65■□□□□ 0.58
UBE3D-203ENST00000369747 GPR88Q9GZN0 384 aa18.65■□□□□ 0.58
UBE3D-203ENST00000369747 PDZD7Q9H5P4 517 aa18.65■□□□□ 0.58
UBE3D-203ENST00000369747 AGO3Q9H9G7 860 aaKnown RBP18.65■□□□□ 0.58
UBE3D-203ENST00000369747 APEX2Q9UBZ4 518 aa18.65■□□□□ 0.58
UBE3D-203ENST00000369747 DNAJC12Q9UKB3 198 aa18.65■□□□□ 0.58
UBE3D-203ENST00000369747 SEC31AO94979 1220 aaKnown RBP18.64■□□□□ 0.58
UBE3D-203ENST00000369747 PRLRP16471 622 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 FERP16591 822 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 GARTP22102 1010 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 ANXA13P27216 316 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 SOX5P35711 763 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 STAT1P42224 750 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 MCCD1P59942 119 aaPredicted RBP18.64■□□□□ 0.58
UBE3D-203ENST00000369747 CBX1P83916 185 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 PPP3CAQ08209 521 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 MBTPS1Q14703 1052 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 DRAP1Q14919 205 aaPredicted RBP18.64■□□□□ 0.58
UBE3D-203ENST00000369747 FAM26DQ5JW98 314 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 ZBTB41Q5SVQ8 909 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 C10orf76Q5T2E6 689 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 CC2D1AQ6P1N0 951 aaPredicted RBP18.64■□□□□ 0.58
UBE3D-203ENST00000369747 NECAB2Q7Z6G3 386 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 PNKPQ96T60 521 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 MSTO1Q9BUK6 570 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 NAGPAQ9UK23 515 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 AGO2Q9UKV8 859 aaKnown RBP18.64■□□□□ 0.58
UBE3D-203ENST00000369747 TNFSF13BQ9Y275 285 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 ATP11BQ9Y2G3 1177 aa18.64■□□□□ 0.58
UBE3D-203ENST00000369747 A0A1B0GUA9 196 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 PDE2AO00408 941 aaPredicted RBP18.64■□□□□ 0.57
UBE3D-203ENST00000369747 EVI5O60447 810 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 RPS6KA5O75582 802 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 GFPT2O94808 682 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 ADRB2P07550 413 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 GHRP10912 638 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 CKAP4Q07065 602 aaKnown RBP18.64■□□□□ 0.57
UBE3D-203ENST00000369747 ZNF568Q3ZCX4 644 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 FBXO47Q5MNV8 452 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 SLFN12LQ6IEE8 588 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 MPZL3Q6UWV2 235 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 CBWD2Q8IUF1 395 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 OLIG1Q8TAK6 271 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 TOX2Q96NM4 488 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 FAM213AQ9BRX8 229 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 RAB21Q9UL25 225 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 DAAM1Q9Y4D1 1078 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 UMODL1Q5DID0 1318 aa18.64■□□□□ 0.57
UBE3D-203ENST00000369747 BTNL10A8MVZ5 291 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 DCDC2CA8MYV0 355 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 FAM189A1O60320 539 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 RHOXF2BP0C7M4 288 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 ACOT2P49753 483 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 MCL1Q07820 350 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 NFX1Q12986 1120 aaKnown RBP18.63■□□□□ 0.57
UBE3D-203ENST00000369747 LPIN1Q14693 890 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 SNRNP35Q16560 246 aaKnown RBP18.63■□□□□ 0.57
UBE3D-203ENST00000369747 PHLDB3Q6NSJ2 640 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 CREG2Q8IUH2 290 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 CAGE1Q8TC20 777 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 RHOXF2Q9BQY4 288 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 TLR10Q9BXR5 811 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 CDT1Q9H211 546 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 ST3GAL5Q9UNP4 418 aa18.63■□□□□ 0.57
UBE3D-203ENST00000369747 PIN4Q9Y237 131 aaKnown RBP18.63■□□□□ 0.57
UBE3D-203ENST00000369747 CCDC151A5D8V7 595 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 P4HA2O15460 535 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 NCK2O43639 380 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 N4BP1O75113 896 aaKnown RBP18.62■□□□□ 0.57
UBE3D-203ENST00000369747 CAND2O75155 1236 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 GCLMP48507 274 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 NAP1L1P55209 391 aaKnown RBP18.62■□□□□ 0.57
UBE3D-203ENST00000369747 BRD3Q15059 726 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 PCBP1Q15365 356 aaKnown RBP eCLIP18.62■□□□□ 0.57
UBE3D-203ENST00000369747 EPC2Q52LR7 807 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 ALKBH5Q6P6C2 394 aaKnown RBP18.62■□□□□ 0.57
UBE3D-203ENST00000369747 CRELD2Q6UXH1 353 aaPredicted RBP18.62■□□□□ 0.57
UBE3D-203ENST00000369747 CEP120Q8N960 986 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 COG1Q8WTW3 980 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 RPGRIP1Q96KN7 1286 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 FBXL18Q96ME1 805 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 OSBPL9Q96SU4 736 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 HYOU1Q9Y4L1 999 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 PCDHGC5Q9Y5F6 944 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 DDX3XO00571 662 aaKnown RBP eCLIP18.62■□□□□ 0.57
UBE3D-203ENST00000369747 TLR3O15455 904 aaKnown RBP18.62■□□□□ 0.57
UBE3D-203ENST00000369747 CD52P31358 61 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 BMS1Q14692 1282 aaKnown RBP18.62■□□□□ 0.57
UBE3D-203ENST00000369747 COL13A1Q5TAT6 717 aaPredicted RBP18.62■□□□□ 0.57
UBE3D-203ENST00000369747 LRRC8DQ7L1W4 858 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 UBE2Q1Q7Z7E8 422 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 GPD1LQ8N335 351 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 PADI3Q9ULW8 664 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 ATP8B3O60423 1300 aa18.62■□□□□ 0.57
UBE3D-203ENST00000369747 EXTL3O43909 919 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms