RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 GOLPH3LQ9H4A5 285 aa20.11■□□□□ 0.81
CHTOP-202ENST00000368687 RXFP1Q9HBX9 757 aa20.11■□□□□ 0.81
CHTOP-202ENST00000368687 NUB1Q9Y5A7 615 aa20.11■□□□□ 0.81
CHTOP-202ENST00000368687 HCFC2Q9Y5Z7 792 aa20.11■□□□□ 0.81
CHTOP-202ENST00000368687 ANK1P16157 1881 aa20.11■□□□□ 0.81
CHTOP-202ENST00000368687 TCF20Q9UGU0 1960 aaKnown RBP20.1■□□□□ 0.81
CHTOP-202ENST00000368687 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.1■□□□□ 0.81
CHTOP-202ENST00000368687 LACTBL1A8MY62 500 aa20.1■□□□□ 0.81
CHTOP-202ENST00000368687 H3BQ06 376 aaPredicted RBP20.1■□□□□ 0.81
CHTOP-202ENST00000368687 GLP2RO95838 553 aa20.1■□□□□ 0.81
CHTOP-202ENST00000368687 KLRC2P26717 231 aa20.1■□□□□ 0.81
CHTOP-202ENST00000368687 ACOT2P49753 483 aa20.1■□□□□ 0.81
CHTOP-202ENST00000368687 SOX4Q06945 474 aaPredicted RBP20.1■□□□□ 0.81
CHTOP-202ENST00000368687 TMEM132DQ14C87 1099 aa20.1■□□□□ 0.81
CHTOP-202ENST00000368687 ZBTB6Q15916 424 aa20.1■□□□□ 0.81
CHTOP-202ENST00000368687 FAM171A1Q5VUB5 890 aa20.1■□□□□ 0.81
CHTOP-202ENST00000368687 PTCRAQ6ISU1 281 aaPredicted RBP20.1■□□□□ 0.81
CHTOP-202ENST00000368687 GRAMD1CQ8IYS0 662 aa20.1■□□□□ 0.81
CHTOP-202ENST00000368687 SMRP1Q8NCR6 262 aa20.1■□□□□ 0.81
CHTOP-202ENST00000368687 AUTS2Q8WXX7 1259 aa20.1■□□□□ 0.81
CHTOP-202ENST00000368687 PIK3R5Q8WYR1 880 aa20.1■□□□□ 0.81
CHTOP-202ENST00000368687 MSLNLQ96KJ4 702 aa20.1■□□□□ 0.81
CHTOP-202ENST00000368687 FGFBP2Q9BYJ0 223 aa20.1■□□□□ 0.81
CHTOP-202ENST00000368687 GTPBP4Q9BZE4 634 aaKnown RBP20.1■□□□□ 0.81
CHTOP-202ENST00000368687 ARHGEF37A1IGU5 675 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 TISP43B9A030 160 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 F8W810 466 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 SYN3O14994 580 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 LINC01565O15544 149 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 MEFVO15553 781 aaPredicted RBP20.09■□□□□ 0.81
CHTOP-202ENST00000368687 KLRC4O43908 158 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 RPN1P04843 607 aaKnown RBP20.09■□□□□ 0.81
CHTOP-202ENST00000368687 CNPP09543 421 aaKnown RBP20.09■□□□□ 0.81
CHTOP-202ENST00000368687 ZBTB41Q5SVQ8 909 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 BRSK2Q8IWQ3 736 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 FMR1NBQ8N0W7 255 aaPredicted RBP20.09■□□□□ 0.81
CHTOP-202ENST00000368687 GPD1LQ8N335 351 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 HASPINQ8TF76 798 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 SCFD1Q8WVM8 642 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 RIN2Q8WYP3 895 aaPredicted RBP20.09■□□□□ 0.81
CHTOP-202ENST00000368687 HPS3Q969F9 1004 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 C18orf25Q96B23 403 aaPredicted RBP20.09■□□□□ 0.81
CHTOP-202ENST00000368687 FAM212AQ96EL1 285 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 TIGD1Q96MW7 591 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 KLHL5Q96PQ7 755 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 FAM213AQ9BRX8 229 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 GOLGA2P5Q9HBQ8 144 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 CLEC1BQ9P126 229 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 PRKAG3Q9UGI9 489 aa20.09■□□□□ 0.81
CHTOP-202ENST00000368687 GRXCR2A6NFK2 248 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 C2CD2LO14523 706 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 RHOBTB3O94955 611 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 FGFR3P22607 806 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 CASP1P29466 404 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 CLCN4P51793 760 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 ITIH3Q06033 890 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 KCNB1Q14721 858 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 SURF1Q15526 300 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 KNOP1Q1ED39 458 aaKnown RBP20.08■□□□□ 0.81
CHTOP-202ENST00000368687 KMT5BQ4FZB7 885 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 SPATA1Q5VX52 437 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 ANKRD54Q6NXT1 300 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 ANKS3Q6ZW76 656 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 TAS1R1Q7RTX1 841 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.08■□□□□ 0.81
CHTOP-202ENST00000368687 HDAC7Q8WUI4 952 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 RABGGTAQ92696 567 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 SLC39A2Q9NP94 309 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 RMND1Q9NWS8 449 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 RBAKQ9NYW8 714 aaPredicted RBP20.08■□□□□ 0.81
CHTOP-202ENST00000368687 CACNG4Q9UBN1 327 aa20.08■□□□□ 0.81
CHTOP-202ENST00000368687 BARX2Q9UMQ3 279 aaPredicted RBP20.08■□□□□ 0.81
CHTOP-202ENST00000368687 VWA8A3KMH1 1905 aa20.08■□□□□ 0.8
CHTOP-202ENST00000368687 TEX28O15482 410 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 GLUD1P00367 558 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 DLX2Q07687 328 aaPredicted RBP20.07■□□□□ 0.8
CHTOP-202ENST00000368687 DPYDQ12882 1025 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 PSMD5Q16401 504 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 JADE1Q6IE81 842 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 CES5AQ6NT32 575 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 LLGL2Q6P1M3 1020 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 CRELD2Q6UXH1 353 aaPredicted RBP20.07■□□□□ 0.8
CHTOP-202ENST00000368687 CEP57Q86XR8 500 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 C12orf56Q8IXR9 622 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 ELOA2Q8IYF1 753 aaPredicted RBP20.07■□□□□ 0.8
CHTOP-202ENST00000368687 GLIS3Q8NEA6 775 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 APPL2Q8NEU8 664 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 VN1R2Q8NFZ6 395 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 SLC22A17Q8WUG5 538 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 CACTINQ8WUQ7 758 aaKnown RBP20.07■□□□□ 0.8
CHTOP-202ENST00000368687 POP1Q99575 1024 aaKnown RBP20.07■□□□□ 0.8
CHTOP-202ENST00000368687 CBWD1Q9BRT8 395 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 AGPAT3Q9NRZ7 376 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 TUBGCP4Q9UGJ1 667 aa20.07■□□□□ 0.8
CHTOP-202ENST00000368687 MTCL1Q9Y4B5 1905 aaKnown RBP20.06■□□□□ 0.8
CHTOP-202ENST00000368687 ZNF233A6NK53 670 aa20.06■□□□□ 0.8
CHTOP-202ENST00000368687 MBTPS2O43462 519 aa20.06■□□□□ 0.8
CHTOP-202ENST00000368687 MCM4P33991 863 aa20.06■□□□□ 0.8
CHTOP-202ENST00000368687 SMAD2Q15796 467 aaKnown RBP20.06■□□□□ 0.8
CHTOP-202ENST00000368687 RTP2Q5QGT7 225 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms