RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ANKRD13AQ8IZ07 590 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 TGS1Q96RS0 853 aaKnown RBP13.6□□□□□ -0.23
PTPRK-207ENST00000368226 TADA3O75528 432 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 CYBBP04839 570 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 TAF11Q15544 211 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 HASPINQ8TF76 798 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 SERPINI1Q99574 410 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 YIPF2Q9BWQ6 316 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 DRC3Q9H069 523 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 AIPL1Q9NZN9 384 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 ITGB3P05106 788 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 UCHL3P15374 230 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 GTF2H1P32780 548 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 GALCP54803 685 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 TSGA10IPQ3SY00 556 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 ADSSL1Q8N142 457 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 TRPV6Q9H1D0 765 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 ALDH8A1Q9H2A2 487 aaPredicted RBP13.6□□□□□ -0.23
PTPRK-207ENST00000368226 PFASO15067 1338 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 TMEM247A6NEH6 219 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 SLC16A3O15427 465 aaKnown RBP13.6□□□□□ -0.23
PTPRK-207ENST00000368226 GYG2O15488 501 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 DCAF6Q58WW2 860 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 ADA2Q9NZK5 511 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 PCDHB7Q9Y5E2 793 aa13.6□□□□□ -0.23
PTPRK-207ENST00000368226 PPRC1Q5VV67 1664 aaKnown RBP13.6□□□□□ -0.23
PTPRK-207ENST00000368226 EEF2KO00418 725 aaKnown RBP13.59□□□□□ -0.23
PTPRK-207ENST00000368226 CTDNEP1O95476 244 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 FDPSP14324 419 aaKnown RBP13.59□□□□□ -0.23
PTPRK-207ENST00000368226 ATN1P54259 1190 aaPredicted RBP13.59□□□□□ -0.23
PTPRK-207ENST00000368226 TKFCQ3LXA3 575 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 RGS9BPQ6ZS82 235 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 TXNRD3Q86VQ6 643 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 NUDCD3Q8IVD9 361 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 CPB2Q96IY4 423 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 C7orf25Q9BPX7 421 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 LRRC1Q9BTT6 524 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 UPF3AQ9H1J1 476 aaKnown RBP13.59□□□□□ -0.23
PTPRK-207ENST00000368226 ABI2Q9NYB9 513 aaPredicted RBP13.59□□□□□ -0.23
PTPRK-207ENST00000368226 ERAP1Q9NZ08 941 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.59□□□□□ -0.231e-12■■■□□ 17.4
PTPRK-207ENST00000368226 GPR75-ASB3A0A0A6YYF3 556 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 VTNP04004 478 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 GYS1P13807 737 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 C2CD6Q53TS8 623 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 TTC23LQ6PF05 361 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 ATPAF2Q8N5M1 289 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 GIPC2Q8TF65 315 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 BTBD6Q96KE9 485 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 CCSER1Q9C0I3 900 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 METTL5Q9NRN9 209 aaKnown RBP13.59□□□□□ -0.23
PTPRK-207ENST00000368226 CNTNAP4Q9C0A0 1308 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 ANO9A1A5B4 782 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 RSPH10B2B2RC85 870 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 RSPH10BP0C881 870 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 KCNA2P16389 499 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 AKT1S1Q96B36 256 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 RUSC1Q9BVN2 902 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 RAD51Q06609 339 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 KYAT1Q16773 422 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 SGSM1Q2NKQ1 1148 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 KCNV2Q8TDN2 545 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 FBXO41Q8TF61 875 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 SENP7Q9BQF6 1050 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 GPAT2Q6NUI2 795 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 ADCK2Q7Z695 626 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 TAF1DQ9H5J8 278 aaPredicted RBP13.59□□□□□ -0.23
PTPRK-207ENST00000368226 SFMBT1Q9UHJ3 866 aa13.59□□□□□ -0.23
PTPRK-207ENST00000368226 CD163L1Q9NR16 1453 aa13.58□□□□□ -0.23
PTPRK-207ENST00000368226 PITPNM2Q9BZ72 1349 aa13.58□□□□□ -0.23
PTPRK-207ENST00000368226 AKT1P31749 480 aa13.58□□□□□ -0.23
PTPRK-207ENST00000368226 PPHLN1Q8NEY8 458 aaKnown RBP13.58□□□□□ -0.23
PTPRK-207ENST00000368226 TSPYL2Q9H2G4 693 aaPredicted RBP13.58□□□□□ -0.23
PTPRK-207ENST00000368226 CPA4Q9UI42 421 aa13.58□□□□□ -0.23
PTPRK-207ENST00000368226 MSH4O15457 936 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 CSDE1O75534 798 aaKnown RBP13.58□□□□□ -0.24
PTPRK-207ENST00000368226 ACTR2P61160 394 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 DEUP1Q05D60 604 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 HIF1AQ16665 826 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 ZNF513Q8N8E2 541 aaPredicted RBP13.58□□□□□ -0.24
PTPRK-207ENST00000368226 STK33Q9BYT3 514 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 CASP4P49662 377 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 FXR1P51114 621 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTPRK-207ENST00000368226 GLB1LQ6UWU2 654 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 RASGRP2Q7LDG7 609 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 DCUN1D1Q96GG9 259 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 CLCA2Q9UQC9 943 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 PRR23AA6NEV1 266 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 MAP3K6O95382 1288 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 SLC25A27O95847 323 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 CLCN3P51790 818 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 MDM2Q00987 491 aaPredicted RBP13.58□□□□□ -0.24
PTPRK-207ENST00000368226 KIZQ2M2Z5 673 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 ZFATQ9P243 1243 aa13.58□□□□□ -0.24
PTPRK-207ENST00000368226 C17orf102A2RUQ5 167 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 ALDH1A1P00352 501 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 CSE1LP55060 971 aaKnown RBP13.57□□□□□ -0.24
PTPRK-207ENST00000368226 TWF1Q12792 350 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 MORF4L2Q15014 288 aa13.57□□□□□ -0.24
PTPRK-207ENST00000368226 SYTL3Q4VX76 610 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms