RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 TNFAIP8L3Q5GJ75 292 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 C1orf220Q5T0J3 134 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 TTC27Q6P3X3 843 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 PADI6Q6TGC4 694 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 PRELID2Q8N945 189 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 REPS2Q8NFH8 660 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 PLEKHO2Q8TD55 490 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 ACCSQ96QU6 501 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 PCDHB18PQ96TA0 734 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 ACP6Q9NPH0 428 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 MTRF1LQ9UGC7 380 aaKnown RBP15.71■□□□□ 0.11
PRKN-204ENST00000366896 RPTORQ8N122 1335 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 CCL15-CCL14A0A0B4J2E2 113 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 ZBED4O75132 1171 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 SKAP2O75563 359 aaPredicted RBP15.7■□□□□ 0.1
PRKN-204ENST00000366896 LYPLA2O95372 231 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 ICAM1P05362 532 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 CCL15Q16663 113 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 GALNTL6Q49A17 601 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 CYFIP1Q7L576 1253 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 C12orf50Q8NA57 414 aaPredicted RBP15.7■□□□□ 0.1
PRKN-204ENST00000366896 BRI3BPQ8WY22 251 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 ZNF570Q96NI8 536 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 SH2D3AQ9BRG2 576 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 ITGB5P18084 799 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 CCND1P24385 295 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 PDE6CP51160 858 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 ALDH5A1P51649 535 aaPredicted RBP15.7■□□□□ 0.1
PRKN-204ENST00000366896 CCNHP51946 323 aaPredicted RBP15.7■□□□□ 0.1
PRKN-204ENST00000366896 FAM71AQ8IYT1 594 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 SLC17A8Q8NDX2 589 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 AGBL1Q96MI9 1066 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 IWS1Q96ST2 819 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 MXRA8Q9BRK3 442 aa15.7■□□□□ 0.1
PRKN-204ENST00000366896 ASCC2Q9H1I8 757 aaPredicted RBP15.7■□□□□ 0.1
PRKN-204ENST00000366896 RAVER2Q9HCJ3 691 aaKnown RBP15.7■□□□□ 0.1
PRKN-204ENST00000366896 ABT1Q9ULW3 272 aaKnown RBP15.7■□□□□ 0.1
PRKN-204ENST00000366896 TCRBV7S2A1N4TA0A589 114 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 SMIM23A6NLE4 172 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 SGPL1O95470 568 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 P4HBP07237 508 aaKnown RBP15.69■□□□□ 0.1
PRKN-204ENST00000366896 COMTP21964 271 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 RPL21P46778 160 aaKnown RBP15.69■□□□□ 0.1
PRKN-204ENST00000366896 MESDQ14696 234 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 CNGA2Q16280 664 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 C11orf91Q3C1V1 193 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 SEL1L2Q5TEA6 688 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 CPXCR1Q8N123 301 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 SLCO2A1Q92959 643 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 STMN4Q9H169 189 aaPredicted RBP15.69■□□□□ 0.1
PRKN-204ENST00000366896 CCPG1Q9ULG6 757 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 SLC10A3P09131 477 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 CHRNB2P17787 502 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 CALRP27797 417 aaKnown RBP15.69■□□□□ 0.1
PRKN-204ENST00000366896 GTF2BQ00403 316 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 NOP9Q86U38 636 aaKnown RBP15.69■□□□□ 0.1
PRKN-204ENST00000366896 XXYLT1Q8NBI6 393 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 BTBD6Q96KE9 485 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 ECT2Q9H8V3 914 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 NOCTQ9UK39 431 aaKnown RBP15.69■□□□□ 0.1
PRKN-204ENST00000366896 MTUS1Q9ULD2 1270 aa15.69■□□□□ 0.1
PRKN-204ENST00000366896 CTDP1Q9Y5B0 961 aaPredicted RBP15.69■□□□□ 0.1
PRKN-204ENST00000366896 TMEM150BA6NC51 233 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 CYP1A2P05177 515 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 RARGP13631 454 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 PLS3P13797 630 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 IFNAR2P48551 515 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 HSD17B4P51659 736 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 GHRHRQ02643 423 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 CDCA2Q69YH5 1023 aaPredicted RBP15.68■□□□□ 0.1
PRKN-204ENST00000366896 IL31RAQ8NI17 732 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 UHMK1Q8TAS1 419 aaKnown RBP15.68■□□□□ 0.1
PRKN-204ENST00000366896 EPS8L1Q8TE68 723 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 SPDL1Q96EA4 605 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 SEMA4AQ9H3S1 761 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 UVRAGQ9P2Y5 699 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 ZNF214Q9UL59 606 aaPredicted RBP15.68■□□□□ 0.1
PRKN-204ENST00000366896 USP15Q9Y4E8 981 aaPredicted RBP15.68■□□□□ 0.1
PRKN-204ENST00000366896 FAM155AB1AL88 458 aaPredicted RBP15.68■□□□□ 0.1
PRKN-204ENST00000366896 BTBD19C9JJ37 291 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 ANKRD63C9JTQ0 380 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 IGF2BP3O00425 579 aaKnown RBP eCLIP15.68■□□□□ 0.1
PRKN-204ENST00000366896 DIAPH2O60879 1101 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 OSBPP22059 807 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 OAZ1P54368 228 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 BNIP1Q12981 228 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 TMEM132BQ14DG7 1078 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 MFSD5Q6N075 450 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 LBX2Q6XYB7 198 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 MIER3Q7Z3K6 550 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 ANKRD23Q86SG2 305 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 GBP7Q8N8V2 638 aaPredicted RBP15.68■□□□□ 0.1
PRKN-204ENST00000366896 ARMC2Q8NEN0 867 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 EPS8L3Q8TE67 593 aaKnown RBP15.68■□□□□ 0.1
PRKN-204ENST00000366896 ART4Q93070 314 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 HHIPL1Q96JK4 782 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 ROPN1BQ9BZX4 212 aaPredicted RBP15.68■□□□□ 0.1
PRKN-204ENST00000366896 ROPN1Q9HAT0 212 aaPredicted RBP15.68■□□□□ 0.1
PRKN-204ENST00000366896 SLC5A4Q9NY91 659 aa15.68■□□□□ 0.1
PRKN-204ENST00000366896 HSPBP1Q9NZL4 362 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms