RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 FXR1P51114 621 aaKnown RBP eCLIP6□□□□□ -1.45
RNU4-28P-201ENST00000364739 KRT85P78386 507 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 HSD11B2P80365 405 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 OCA2Q04671 838 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 DPTQ07507 201 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 B3GNTL1Q67FW5 361 aaPredicted RBP6□□□□□ -1.45
RNU4-28P-201ENST00000364739 TMEM132CQ8N3T6 1108 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 TBC1D15Q8TC07 691 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 MRGPRX4Q96LA9 322 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 BRINP2Q9C0B6 783 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 SERHL2Q9H4I8 314 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 LUC7L2Q9Y383 392 aaKnown RBP6□□□□□ -1.45
RNU4-28P-201ENST00000364739 SHROOM4Q9ULL8 1493 aa6□□□□□ -1.45
RNU4-28P-201ENST00000364739 GAGE12BA1L429 117 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 GAGE12HA6NDE8 117 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 SPDEFO95238 335 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 CFIP05156 583 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 SPATA31D3P0C874 917 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 CKBP12277 381 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 FGFR4P22455 802 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 GCSHP23434 173 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 DDX6P26196 483 aaKnown RBP eCLIP5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 ZEB1P37275 1124 aaPredicted RBP5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 ADKP55263 362 aaKnown RBP5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 ANAPC15P60006 121 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 DSC2Q02487 901 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 FLYWCH1Q4VC44 716 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 KHDC1Q4VXA5 237 aaKnown RBP5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 SPATA31D4Q6ZUB0 917 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 CMTR2Q8IYT2 770 aaKnown RBP5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 MIER2Q8N344 545 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 FITM2Q8N6M3 262 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 AMER2Q8N7J2 671 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 GPR150Q8NGU9 434 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 CEP89Q96ST8 783 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 FAM30AQ9NZY2 134 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 HSFX1Q9UBD0 423 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 SLC45A2Q9UMX9 530 aa5.99□□□□□ -1.45
RNU4-28P-201ENST00000364739 A0A087X1B8 175 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 FOXN1O15353 648 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 RAMP2O60895 175 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 BMPR1AP36894 532 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 RECQLP46063 649 aaPredicted RBP5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 EXOSC10Q01780 885 aaKnown RBP5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 GUCY1B3Q02153 619 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 DACT2Q5SW24 774 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 UTP14CQ5TAP6 766 aaKnown RBP5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 CATIPQ7Z7H3 387 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 MRGPRGQ86SM5 289 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 ZBTB46Q86UZ6 589 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 ARHGEF19Q8IW93 802 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 ASB10Q8WXI3 467 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 NACC2Q96BF6 587 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 RNF31Q96EP0 1072 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 ALOXE3Q9BYJ1 711 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 REXO4Q9GZR2 422 aaKnown RBP5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 AASDHPPTQ9NRN7 309 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 VSX1Q9NZR4 365 aaPredicted RBP5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 IP6K2Q9UHH9 426 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 SPEF1Q9Y4P9 236 aa5.98□□□□□ -1.45
RNU4-28P-201ENST00000364739 MARCH11A6NNE9 402 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 AGFG2O95081 481 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 ZFPL1O95159 310 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 IL33O95760 270 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 GPANK1O95872 356 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 ALAS1P13196 640 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 PDCP20941 246 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 INHBCP55103 352 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 IGBP1P78318 339 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 TLE1Q04724 770 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 SLFN5Q08AF3 891 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 CRB2Q5IJ48 1285 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 GADL1Q6ZQY3 521 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 CPA6Q8N4T0 437 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 BEND2Q8NDZ0 799 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 HOOK2Q96ED9 719 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 TLR10Q9BXR5 811 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 DDX56Q9NY93 547 aaKnown RBP5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 RNF181Q9P0P0 153 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 DMRT1Q9Y5R6 373 aa5.97□□□□□ -1.45
RNU4-28P-201ENST00000364739 GRID2IPA4D2P6 1211 aa5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 SGTAO43765 313 aa5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 CDKL5O76039 1030 aa5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 CD1AP06126 327 aa5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 HLA-DOAP06340 250 aa5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 FCER1AP12319 257 aa5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 NEK2P51955 445 aa5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 SNAPC2Q13487 334 aa5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 PABPC1LQ4VXU2 614 aaKnown RBP5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 PCSK4Q6UW60 755 aa5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 LCORLQ8N3X6 602 aa5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 NSUN7Q8NE18 718 aaKnown RBP5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 NSUN6Q8TEA1 469 aaKnown RBP5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 CHMP4CQ96CF2 233 aa5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 AGAP2Q99490 1192 aa5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 RNPEPQ9H4A4 650 aa5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 MTO1Q9Y2Z2 717 aaKnown RBP5.96□□□□□ -1.46
RNU4-28P-201ENST00000364739 PCDHA3Q9Y5H8 950 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms