RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 RAB32Q13637 225 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 STILQ15468 1287 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TIGD6Q17RP2 521 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SKIDA1Q1XH10 827 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 AGAP9Q5VTM2 703 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 VASNQ6EMK4 673 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 PAQR3Q6TCH7 311 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 DPP8Q6V1X1 898 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SPOCD1Q6ZMY3 1216 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 Q6ZVL8 140 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 NEK10Q6ZWH5 1172 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CXXC5Q7LFL8 322 aaKnown RBP4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 PPP1R3BQ86XI6 285 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 FAM126BQ8IXS8 530 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ADGRG2Q8IZP9 1017 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CCHCR1Q8TD31 782 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 OTUD7AQ8TE49 926 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 HERVK_113Q902F9 699 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MISP3Q96FF7 219 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CCDC120Q96HB5 630 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 DYDC2Q96IM9 177 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TTC14Q96N46 770 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ALPK1Q96QP1 1244 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 P2RX7Q99572 595 aaKnown RBP4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TREX2Q9BQ50 279 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 NUDT16L1Q9BRJ7 211 aaKnown RBP4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 KATNAL1Q9BW62 490 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MAGEB5Q9BZ81 275 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ZNF518BQ9C0D4 1074 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 RSPH9Q9H1X1 276 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 DHX36Q9H2U1 1008 aaKnown RBP4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ADAM7Q9H2U9 754 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CARS2Q9HA77 564 aaKnown RBP4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SMURF2Q9HAU4 748 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 BCO1Q9HAY6 547 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 POLR3BQ9NW08 1133 aaPredicted RBP4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SRP68Q9UHB9 627 aaKnown RBP4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 HERC5Q9UII4 1024 aaKnown RBP4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TMEM59LQ9UK28 342 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ITGB1BP2Q9UKP3 347 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ZDHHC8Q9ULC8 765 aa4.29□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CNTNAP5Q8WYK1 1306 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ZC3H12DA2A288 527 aaKnown RBP4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 AQP12BA6NM10 295 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TISP43B9A030 160 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 B9A039 149 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 F8W031 263 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 PRAMEF4O60810 478 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 GFPT2O94808 682 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 LY86O95711 162 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ITGA2BP08514 1039 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 PNLIPP16233 465 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 DDCP20711 480 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 LIFRP42702 1097 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 RAD52P43351 418 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 KCNJ5P48544 419 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CARSP49589 748 aaKnown RBP4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TUBP50607 506 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CD69Q07108 199 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MAPK7Q13164 816 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 IKZF1Q13422 519 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 HABP2Q14520 560 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 KIR3DS1Q14943 382 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 NR1I3Q14994 352 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MST1LQ2TV78 715 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 GPATCH4Q5T3I0 446 aaKnown RBP4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TEPPQ6URK8 271 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ABHD15Q6UXT9 468 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 PRR23CQ6ZRP0 262 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MICU3Q86XE3 530 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 GATAD2AQ86YP4 633 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 C2CD5Q86YS7 1000 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MIB1Q86YT6 1006 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 UNC5BQ8IZJ1 945 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 PQLC1Q8N2U9 271 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 CELF5Q8N6W0 485 aaKnown RBP4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 VGLL2Q8N8G2 317 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 OR7D4Q8NG98 312 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 OR5AN1Q8NGI8 311 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SHKBP1Q8TBC3 707 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ADAMTS18Q8TE60 1221 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 ZNF384Q8TF68 577 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 STYXQ8WUJ0 223 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 RFFLQ8WZ73 363 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 MAML1Q92585 1016 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 RAB24Q969Q5 203 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TSPAN17Q96FV3 270 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 RSRC1Q96IZ7 334 aaKnown RBP4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SNX27Q96L92 541 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 UHRF1Q96T88 793 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SMYD2Q9NRG4 433 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 LANCL2Q9NS86 450 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 OLA1Q9NTK5 396 aaKnown RBP4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 TMEM140Q9NV12 185 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 RGL1Q9NZL6 768 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 IGSF9Q9P2J2 1179 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SAE1Q9UBE0 346 aaPredicted RBP4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 SRRDQ9UH36 339 aa4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 DBR1Q9UK59 544 aaKnown RBP4.28□□□□□ -1.72
RNU6-1249P-201ENST00000363237 A0A1W2PRQ8 180 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms