RNA–Protein interactions for RNA: ENST00000361987.5

CNTF-201, Transcript of ciliary neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTF, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTF-201ENST00000361987 LRRIQ3A6PVS8 624 aaPredicted RBP13.62□□□□□ -0.23
CNTF-201ENST00000361987 SLC16A3O15427 465 aaKnown RBP13.62□□□□□ -0.23
CNTF-201ENST00000361987 B3GAT3O94766 335 aa13.62□□□□□ -0.23
CNTF-201ENST00000361987 CYP3A5P20815 502 aa13.62□□□□□ -0.23
CNTF-201ENST00000361987 BFSP1Q12934 665 aa13.62□□□□□ -0.23
CNTF-201ENST00000361987 UPP1Q16831 310 aa13.62□□□□□ -0.23
CNTF-201ENST00000361987 HSP90AA4PQ58FG1 418 aa13.62□□□□□ -0.23
CNTF-201ENST00000361987 WDR49Q8IV35 697 aa13.62□□□□□ -0.23
CNTF-201ENST00000361987 KLHL23Q8NBE8 558 aa13.62□□□□□ -0.23
CNTF-201ENST00000361987 OR5B17Q8NGF7 314 aa13.62□□□□□ -0.23
CNTF-201ENST00000361987 HASPINQ8TF76 798 aa13.62□□□□□ -0.23
CNTF-201ENST00000361987 DDX27Q96GQ7 796 aaKnown RBP13.62□□□□□ -0.23
CNTF-201ENST00000361987 COLEC11Q9BWP8 271 aa13.62□□□□□ -0.23
CNTF-201ENST00000361987 INTS13Q9NVM9 706 aa13.62□□□□□ -0.23
CNTF-201ENST00000361987 SPG21Q9NZD8 308 aa13.62□□□□□ -0.23
CNTF-201ENST00000361987 ARMCX3Q9UH62 379 aaPredicted RBP13.62□□□□□ -0.23
CNTF-201ENST00000361987 PTPRJQ12913 1337 aa13.62□□□□□ -0.23
CNTF-201ENST00000361987 F8W810 466 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 PODXLO00592 558 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 TADA2AO75478 443 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 FGF18O76093 207 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 GNA14O95837 355 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 TNNC2P02585 160 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 KRT19P08727 400 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 RPL9P32969 192 aaKnown RBP13.61□□□□□ -0.23
CNTF-201ENST00000361987 ZNF165P49910 485 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 KRT17Q04695 432 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 DCAF17Q5H9S7 520 aaPredicted RBP13.61□□□□□ -0.23
CNTF-201ENST00000361987 TCERG1LQ5VWI1 586 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 DCLRE1AQ6PJP8 1040 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 FRMD5Q7Z6J6 570 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 TMEM173Q86WV6 379 aaPredicted RBP13.61□□□□□ -0.23
CNTF-201ENST00000361987 FBXO22Q8NEZ5 403 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 ENOX1Q8TC92 643 aaKnown RBP13.61□□□□□ -0.23
CNTF-201ENST00000361987 TMC2Q8TDI7 906 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 ZNF516Q92618 1163 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 BORCS6Q96GS4 357 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 TMEM169Q96HH4 297 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 UROC1Q96N76 676 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 SAMD11Q96NU1 681 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 CGRRF1Q99675 332 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 PLVAPQ9BX97 442 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 MMRN2Q9H8L6 949 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 METTL14Q9HCE5 456 aaKnown RBP13.61□□□□□ -0.23
CNTF-201ENST00000361987 ALG13Q9NP73 1137 aaKnown RBP13.61□□□□□ -0.23
CNTF-201ENST00000361987 NFE2L3Q9Y4A8 694 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 CHD9Q3L8U1 2897 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 CARNS1A5YM72 827 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 IKBKBO14920 756 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 RB1P06400 928 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 TRIM49P0CI25 452 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 TRIM49CP0CI26 452 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 IGFBP6P24592 240 aaPredicted RBP13.61□□□□□ -0.23
CNTF-201ENST00000361987 PPM1AP35813 382 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 ZNF697Q5TEC3 545 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 IGSF21Q96ID5 467 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 FAM161BQ96MY7 647 aa13.61□□□□□ -0.23
CNTF-201ENST00000361987 C11orf84Q9BUA3 381 aaPredicted RBP13.61□□□□□ -0.23
CNTF-201ENST00000361987 SAMSN1Q9NSI8 373 aaKnown RBP13.61□□□□□ -0.23
CNTF-201ENST00000361987 R3HCC1Q9Y3T6 440 aaKnown RBP13.61□□□□□ -0.23
CNTF-201ENST00000361987 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.61□□□□□ -0.23
CNTF-201ENST00000361987 C5orf67F2Z3F1 127 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 PHACTR2O75167 634 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 ITGB3P05106 788 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 ITGB1P05556 798 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 GCLMP48507 274 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 CLDN10P78369 228 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 MYL5Q02045 173 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 BIRC3Q13489 604 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 C9orf57Q5W0N0 161 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 TRAPPC11Q7Z392 1133 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 SLC39A11Q8N1S5 342 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 C1orf127Q8N9H9 656 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 TTYH1Q9H313 450 aaPredicted RBP13.6□□□□□ -0.23
CNTF-201ENST00000361987 THAP9Q9H5L6 903 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 MAGEC2Q9UBF1 373 aaPredicted RBP13.6□□□□□ -0.23
CNTF-201ENST00000361987 NUB1Q9Y5A7 615 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 ANK1P16157 1881 aa13.6□□□□□ -0.23
CNTF-201ENST00000361987 RFXAPO00287 272 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 CSPG5O95196 566 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 KIF4AO95239 1232 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 LRPAP1P30533 357 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 POLR2BP30876 1174 aaKnown RBP13.59□□□□□ -0.23
CNTF-201ENST00000361987 AP3M2P53677 418 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 GPM6BQ13491 265 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 C1orf220Q5T0J3 134 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 SCARA3Q6AZY7 606 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 FAM114A1Q8IWE2 563 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 AOPEPQ8N6M6 819 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 C3orf58Q8NDZ4 430 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 BCL7CQ8WUZ0 217 aaPredicted RBP13.59□□□□□ -0.23
CNTF-201ENST00000361987 CNOT6LQ96LI5 555 aaKnown RBP13.59□□□□□ -0.23
CNTF-201ENST00000361987 FANCLQ9NW38 375 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 MARCH5Q9NX47 278 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 PUF60Q9UHX1 559 aaKnown RBP13.59□□□□□ -0.23
CNTF-201ENST00000361987 ADAM28Q9UKQ2 775 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 ITGA11Q9UKX5 1188 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 AGAP1Q9UPQ3 857 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 TMEM265A0A087WTH1 108 aa13.59□□□□□ -0.23
CNTF-201ENST00000361987 EPOPA6NHQ4 379 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms