RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CGRRF1Q99675 332 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 ZSWIM1Q9BR11 485 aa24.19■■□□□ 1.46
LDB1-201ENST00000361198 CELF4Q9BZC1 486 aaKnown RBP24.19■■□□□ 1.46
LDB1-201ENST00000361198 CLDN3O15551 220 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 TTI1O43156 1089 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 SRGAP2CP0DJJ0 459 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 COPB2P35606 906 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 IER5Q5VY09 327 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 B4GALNT4Q76KP1 1039 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 UBL4BQ8N7F7 174 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 RABEP2Q9H5N1 569 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 ERVK-5Q9HDB9 667 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 PCDHB2Q9Y5E7 798 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 ATXN2Q99700 1313 aaKnown RBP24.18■■□□□ 1.46
LDB1-201ENST00000361198 UNGP13051 313 aaPredicted RBP24.18■■□□□ 1.46
LDB1-201ENST00000361198 GJA5P36382 358 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 MDH1P40925 334 aaKnown RBP24.18■■□□□ 1.46
LDB1-201ENST00000361198 PEX5P50542 639 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 GUCY1A3Q02108 690 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 LAMTOR4Q0VGL1 99 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 SCARA3Q6AZY7 606 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 CCDC62Q6P9F0 684 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 ZPBP2Q6X784 338 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 DHX37Q8IY37 1157 aaKnown RBP24.18■■□□□ 1.46
LDB1-201ENST00000361198 ATP8B4Q8TF62 1192 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 CD101Q93033 1021 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 L3MBTL3Q96JM7 780 aaPredicted RBP24.18■■□□□ 1.46
LDB1-201ENST00000361198 SPATA33Q96N06 139 aa24.18■■□□□ 1.46
LDB1-201ENST00000361198 GOLGA6L10A6NI86 522 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 ACO1P21399 889 aaKnown RBP24.17■■□□□ 1.46
LDB1-201ENST00000361198 TNFSF9P41273 254 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 PLPPR4Q7Z2D5 763 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 NAP1L3Q99457 506 aaPredicted RBP24.17■■□□□ 1.46
LDB1-201ENST00000361198 CCDC113Q9H0I3 377 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 UVRAGQ9P2Y5 699 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 CNOT8Q9UFF9 292 aaKnown RBP24.17■■□□□ 1.46
LDB1-201ENST00000361198 PPME1Q9Y570 386 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 DAPK3O43293 454 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 MYZAPP0CAP1 466 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 EFNA5P52803 228 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 MTMR3Q13615 1198 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 CUL2Q13617 745 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 PLCB4Q15147 1175 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 ZBTB33Q86T24 672 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 PACS2Q86VP3 889 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 SPATS2Q86XZ4 545 aaKnown RBP24.17■■□□□ 1.46
LDB1-201ENST00000361198 RNF149Q8NC42 400 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 PDGFCQ9NRA1 345 aa24.17■■□□□ 1.46
LDB1-201ENST00000361198 IGKV6-21A0A0C4DH24 114 aa24.16■■□□□ 1.46
LDB1-201ENST00000361198 FAM189A1O60320 539 aa24.16■■□□□ 1.46
LDB1-201ENST00000361198 PTENP60484 403 aa24.16■■□□□ 1.46
LDB1-201ENST00000361198 ZNF844Q08AG5 666 aa24.16■■□□□ 1.46
LDB1-201ENST00000361198 PTGISQ16647 500 aa24.16■■□□□ 1.46
LDB1-201ENST00000361198 TTC31Q49AM3 519 aaPredicted RBP24.16■■□□□ 1.46
LDB1-201ENST00000361198 CDCA2Q69YH5 1023 aaPredicted RBP24.16■■□□□ 1.46
LDB1-201ENST00000361198 TCHPQ9BT92 498 aa24.16■■□□□ 1.46
LDB1-201ENST00000361198 MRPL4Q9BYD3 311 aaKnown RBP24.16■■□□□ 1.46
LDB1-201ENST00000361198 MROH8Q9H579 483 aa24.16■■□□□ 1.46
LDB1-201ENST00000361198 FAM114A2Q9NRY5 505 aa24.16■■□□□ 1.46
LDB1-201ENST00000361198 TOM1L1O75674 476 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 PPP2R5EQ16537 467 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 ARMC9Q7Z3E5 817 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 ARFGAP2Q8N6H7 521 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 MORC4Q8TE76 937 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 TRAPPC12Q8WVT3 735 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 WNT8AQ9H1J5 351 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 EFCC1Q9HA90 598 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 NUB1Q9Y5A7 615 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 UMODL1Q5DID0 1318 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 TXNP10599 105 aaKnown RBP24.15■■□□□ 1.46
LDB1-201ENST00000361198 CYP2C8P10632 490 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 CTNNA1P35221 906 aaKnown RBP24.15■■□□□ 1.46
LDB1-201ENST00000361198 FLT3P36888 993 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 MXD4Q14582 209 aaPredicted RBP24.15■■□□□ 1.46
LDB1-201ENST00000361198 RUFY4Q6ZNE9 571 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 ZNF677Q86XU0 584 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 TCP11Q8WWU5 503 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 CPA5Q8WXQ8 436 aa24.15■■□□□ 1.46
LDB1-201ENST00000361198 ACO2Q99798 780 aaKnown RBP24.15■■□□□ 1.46
LDB1-201ENST00000361198 SPOPO43791 374 aa24.14■■□□□ 1.46
LDB1-201ENST00000361198 BPIFB4P59827 614 aa24.14■■□□□ 1.46
LDB1-201ENST00000361198 NOP14P78316 857 aaKnown RBP24.14■■□□□ 1.46
LDB1-201ENST00000361198 TMC3Q7Z5M5 1100 aa24.14■■□□□ 1.46
LDB1-201ENST00000361198 BRSK2Q8IWQ3 736 aa24.14■■□□□ 1.46
LDB1-201ENST00000361198 UTP11Q9Y3A2 253 aaKnown RBP24.14■■□□□ 1.46
LDB1-201ENST00000361198 GOLGA6L10A0A0M3HER8 536 aa24.14■■□□□ 1.45
LDB1-201ENST00000361198 GAS2O43903 313 aaKnown RBP24.14■■□□□ 1.45
LDB1-201ENST00000361198 CLTAP09496 248 aa24.14■■□□□ 1.45
LDB1-201ENST00000361198 PYGMP11217 842 aa24.14■■□□□ 1.45
LDB1-201ENST00000361198 NCOA4Q13772 614 aa24.14■■□□□ 1.45
LDB1-201ENST00000361198 EAPPQ56P03 285 aaPredicted RBP24.14■■□□□ 1.45
LDB1-201ENST00000361198 TMEM270Q6UE05 265 aa24.14■■□□□ 1.45
LDB1-201ENST00000361198 MCOLN2Q8IZK6 566 aa24.14■■□□□ 1.45
LDB1-201ENST00000361198 ZNF668Q96K58 619 aaPredicted RBP24.14■■□□□ 1.45
LDB1-201ENST00000361198 PRKCBP05771 671 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 GJB1P08034 283 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 CFHP08603 1231 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 RHPN2Q8IUC4 686 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 OR2W6PQ8NHA6 318 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 ZBTB10Q96DT7 871 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms