RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 OR8K1Q8NGG5 319 aa23.58■■□□□ 1.37
HOXA4-201ENST00000360046 BAP1Q92560 729 aa23.58■■□□□ 1.37
HOXA4-201ENST00000360046 ELMO3Q96BJ8 720 aa23.58■■□□□ 1.37
HOXA4-201ENST00000360046 ZMAT2Q96NC0 199 aaKnown RBP23.58■■□□□ 1.37
HOXA4-201ENST00000360046 SPAG5Q96R06 1193 aa23.58■■□□□ 1.37
HOXA4-201ENST00000360046 PANX2Q96RD6 677 aa23.58■■□□□ 1.37
HOXA4-201ENST00000360046 IMPG2Q9BZV3 1241 aa23.58■■□□□ 1.37
HOXA4-201ENST00000360046 UBE2TQ9NPD8 197 aaPredicted RBP23.58■■□□□ 1.37
HOXA4-201ENST00000360046 C1orf112Q9NSG2 853 aa23.58■■□□□ 1.37
HOXA4-201ENST00000360046 FBXL5Q9UKA1 691 aa23.58■■□□□ 1.37
HOXA4-201ENST00000360046 LRRC53A6NM62 1247 aa23.57■■□□□ 1.36
HOXA4-201ENST00000360046 RTN4RL1Q86UN2 441 aaPredicted RBP23.57■■□□□ 1.36
HOXA4-201ENST00000360046 ECHDC2Q86YB7 292 aa23.57■■□□□ 1.36
HOXA4-201ENST00000360046 C7orf61Q8IZ16 206 aa23.57■■□□□ 1.36
HOXA4-201ENST00000360046 PPM1KQ8N3J5 372 aa23.57■■□□□ 1.36
HOXA4-201ENST00000360046 C1orf127Q8N9H9 656 aa23.57■■□□□ 1.36
HOXA4-201ENST00000360046 LINC01599Q8WXQ3 324 aa23.57■■□□□ 1.36
HOXA4-201ENST00000360046 APBB2Q92870 758 aa23.57■■□□□ 1.36
HOXA4-201ENST00000360046 PGBD4Q96DM1 585 aa23.57■■□□□ 1.36
HOXA4-201ENST00000360046 ZFP42Q96MM3 310 aa23.57■■□□□ 1.36
HOXA4-201ENST00000360046 KCNF1Q9H3M0 494 aa23.57■■□□□ 1.36
HOXA4-201ENST00000360046 DPP3Q9NY33 737 aa23.57■■□□□ 1.36
HOXA4-201ENST00000360046 PCDH10Q9P2E7 1040 aa23.57■■□□□ 1.36
HOXA4-201ENST00000360046 DNAJC12Q9UKB3 198 aa23.57■■□□□ 1.36
HOXA4-201ENST00000360046 AJAP1Q9UKB5 411 aaPredicted RBP23.57■■□□□ 1.36
HOXA4-201ENST00000360046 SMIM28A0A1B0GU29 152 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 ZC3H11AO75152 810 aaKnown RBP eCLIP23.56■■□□□ 1.36
HOXA4-201ENST00000360046 CST3P01034 146 aaPredicted RBP23.56■■□□□ 1.36
HOXA4-201ENST00000360046 ITGB3P05106 788 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 RFX1P22670 979 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 MLH1P40692 756 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 GUCY2FP51841 1108 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 HS1BP3Q53T59 392 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 PDXDC1Q6P996 788 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 SLC24A5Q71RS6 500 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 TMEM130Q8N3G9 435 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 RPS6KC1Q96S38 1066 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 DNAJC7Q99615 494 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 HTATIP2Q9BUP3 242 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 TSPYL2Q9H2G4 693 aaPredicted RBP23.56■■□□□ 1.36
HOXA4-201ENST00000360046 R3HCC1Q9Y3T6 440 aaKnown RBP23.56■■□□□ 1.36
HOXA4-201ENST00000360046 NRDCO43847 1150 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 CXCL10P02778 98 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 KCNE1P15382 129 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 ATF7P17544 494 aaPredicted RBP23.56■■□□□ 1.36
HOXA4-201ENST00000360046 MYL6P60660 151 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 XKR4Q5GH76 650 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 SCARA3Q6AZY7 606 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 AGMOQ6ZNB7 445 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 TMEM199Q8N511 208 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 BEST2Q8NFU1 509 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 GAD1Q99259 594 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 NAA15Q9BXJ9 866 aaKnown RBP23.56■■□□□ 1.36
HOXA4-201ENST00000360046 TUBGCP4Q9UGJ1 667 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 ITGA11Q9UKX5 1188 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 GIT1Q9Y2X7 761 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 DAAM1Q9Y4D1 1078 aa23.56■■□□□ 1.36
HOXA4-201ENST00000360046 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.56■■□□□ 1.36
HOXA4-201ENST00000360046 C9IYK1 514 aa23.55■■□□□ 1.36
HOXA4-201ENST00000360046 RFC2P35250 354 aa23.55■■□□□ 1.36
HOXA4-201ENST00000360046 ARHGAP44Q17R89 818 aa23.55■■□□□ 1.36
HOXA4-201ENST00000360046 SPOPLQ6IQ16 392 aa23.55■■□□□ 1.36
HOXA4-201ENST00000360046 GPIHBP1Q8IV16 184 aa23.55■■□□□ 1.36
HOXA4-201ENST00000360046 C18orf25Q96B23 403 aaPredicted RBP23.55■■□□□ 1.36
HOXA4-201ENST00000360046 RSAD1Q9HA92 442 aa23.55■■□□□ 1.36
HOXA4-201ENST00000360046 ZNHIT6Q9NWK9 470 aaKnown RBP23.55■■□□□ 1.36
HOXA4-201ENST00000360046 SIX4Q9UIU6 781 aa23.55■■□□□ 1.36
HOXA4-201ENST00000360046 UBQLN1Q9UMX0 589 aaKnown RBP23.55■■□□□ 1.36
HOXA4-201ENST00000360046 ARL5CA6NH57 179 aa23.54■■□□□ 1.36
HOXA4-201ENST00000360046 XPOTO43592 962 aaKnown RBP23.54■■□□□ 1.36
HOXA4-201ENST00000360046 CSF2RAP15509 400 aa23.54■■□□□ 1.36
HOXA4-201ENST00000360046 POLR2BP30876 1174 aaKnown RBP23.54■■□□□ 1.36
HOXA4-201ENST00000360046 NOP14P78316 857 aaKnown RBP23.54■■□□□ 1.36
HOXA4-201ENST00000360046 MFSD5Q6N075 450 aa23.54■■□□□ 1.36
HOXA4-201ENST00000360046 CCDC112Q8NEF3 446 aa23.54■■□□□ 1.36
HOXA4-201ENST00000360046 TATDN2Q93075 761 aa23.54■■□□□ 1.36
HOXA4-201ENST00000360046 TSPAN18Q96SJ8 248 aa23.54■■□□□ 1.36
HOXA4-201ENST00000360046 BAG1Q99933 345 aaPredicted RBP23.54■■□□□ 1.36
HOXA4-201ENST00000360046 NUCKS1Q9H1E3 243 aaKnown RBP23.54■■□□□ 1.36
HOXA4-201ENST00000360046 PTGESO14684 152 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 EVI5O60447 810 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 MFAP3P55082 362 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 ZBTB6Q15916 424 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 TCTN1Q2MV58 587 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 SGSM1Q2NKQ1 1148 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 ZNF699Q32M78 642 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 SFMBT2Q5VUG0 894 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 KAT5Q92993 513 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 STK33Q9BYT3 514 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 UBN1Q9NPG3 1134 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 ENPP3O14638 875 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 ASS1P00966 412 aaKnown RBP23.53■■□□□ 1.36
HOXA4-201ENST00000360046 SKILP12757 684 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 CCZ1BP86790 482 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 CCZ1P86791 482 aaPredicted RBP23.53■■□□□ 1.36
HOXA4-201ENST00000360046 DRAP1Q14919 205 aaPredicted RBP23.53■■□□□ 1.36
HOXA4-201ENST00000360046 ZNF598Q86UK7 904 aaKnown RBP23.53■■□□□ 1.36
HOXA4-201ENST00000360046 HELQQ8TDG4 1101 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 DPF3Q92784 378 aa23.53■■□□□ 1.36
HOXA4-201ENST00000360046 APOBEC3GQ9HC16 384 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms