RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ZC3H11AO75152 810 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCNE1-202ENST00000357943 EEF1GP26641 437 aaKnown RBP16.08■□□□□ 0.16
CCNE1-202ENST00000357943 PBX3P40426 434 aa16.08■□□□□ 0.16
CCNE1-202ENST00000357943 MTIF2P46199 727 aaKnown RBP16.08■□□□□ 0.16
CCNE1-202ENST00000357943 TUSC3Q13454 348 aa16.08■□□□□ 0.16
CCNE1-202ENST00000357943 COLGALT2Q8IYK4 626 aa16.08■□□□□ 0.16
CCNE1-202ENST00000357943 C1orf127Q8N9H9 656 aa16.08■□□□□ 0.16
CCNE1-202ENST00000357943 BEST2Q8NFU1 509 aa16.08■□□□□ 0.16
CCNE1-202ENST00000357943 ANKRD36BP1Q96IX9 119 aa16.08■□□□□ 0.16
CCNE1-202ENST00000357943 FAM193BQ96PV7 902 aaPredicted RBP16.08■□□□□ 0.16
CCNE1-202ENST00000357943 TSPAN18Q96SJ8 248 aa16.08■□□□□ 0.16
CCNE1-202ENST00000357943 PBX4Q9BYU1 374 aa16.08■□□□□ 0.16
CCNE1-202ENST00000357943 RBSNQ9H1K0 784 aa16.08■□□□□ 0.16
CCNE1-202ENST00000357943 SLC38A7Q9NVC3 462 aa16.08■□□□□ 0.16
CCNE1-202ENST00000357943 GOLGA6L19H0YKK7 550 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 XPOTO43592 962 aaKnown RBP16.07■□□□□ 0.16
CCNE1-202ENST00000357943 ARHGEF15O94989 841 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 C4BPAP04003 597 aaKnown RBP16.07■□□□□ 0.16
CCNE1-202ENST00000357943 LINC00271P0C7V0 271 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 CYP3A5P20815 502 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 CDK11BP21127 795 aaKnown RBP16.07■□□□□ 0.16
CCNE1-202ENST00000357943 CLCNKBP51801 687 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 CBWD6Q4V339 395 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 CBWD3Q5JTY5 395 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 CBWD5Q5RIA9 395 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 PRPF38BQ5VTL8 546 aaKnown RBP16.07■□□□□ 0.16
CCNE1-202ENST00000357943 TDRD10Q5VZ19 366 aaKnown RBP16.07■□□□□ 0.16
CCNE1-202ENST00000357943 SV2AQ7L0J3 742 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 TRAPPC11Q7Z392 1133 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 FIBCD1Q8N539 461 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 CXorf38Q8TB03 319 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 CACTINQ8WUQ7 758 aaKnown RBP16.07■□□□□ 0.16
CCNE1-202ENST00000357943 TUBGCP2Q9BSJ2 902 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 DPP3Q9NY33 737 aa16.07■□□□□ 0.16
CCNE1-202ENST00000357943 YBX2Q9Y2T7 364 aaKnown RBP16.07■□□□□ 0.16
CCNE1-202ENST00000357943 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.07■□□□□ 0.16
CCNE1-202ENST00000357943 F8W810 466 aa16.06■□□□□ 0.16
CCNE1-202ENST00000357943 TNNC2P02585 160 aa16.06■□□□□ 0.16
CCNE1-202ENST00000357943 ITGB3P05106 788 aa16.06■□□□□ 0.16
CCNE1-202ENST00000357943 CA3P07451 260 aa16.06■□□□□ 0.16
CCNE1-202ENST00000357943 PRKCSHP14314 528 aaPredicted RBP16.06■□□□□ 0.16
CCNE1-202ENST00000357943 IGFBP6P24592 240 aaPredicted RBP16.06■□□□□ 0.16
CCNE1-202ENST00000357943 OR1G1P47890 313 aa16.06■□□□□ 0.16
CCNE1-202ENST00000357943 KCNH2Q12809 1159 aa16.06■□□□□ 0.16
CCNE1-202ENST00000357943 KRT31Q15323 416 aa16.06■□□□□ 0.16
CCNE1-202ENST00000357943 UPP1Q16831 310 aa16.06■□□□□ 0.16
CCNE1-202ENST00000357943 SPOUT1Q5T280 376 aaKnown RBP16.06■□□□□ 0.16
CCNE1-202ENST00000357943 C15orf39Q6ZRI6 1047 aa16.06■□□□□ 0.16
CCNE1-202ENST00000357943 TAB2Q9NYJ8 693 aa16.06■□□□□ 0.16
CCNE1-202ENST00000357943 SIX4Q9UIU6 781 aa16.06■□□□□ 0.16
CCNE1-202ENST00000357943 PCDHA11Q9Y5I1 949 aa16.06■□□□□ 0.16
CCNE1-202ENST00000357943 LINC01553A4QN01 128 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 NT5C1B-RDH14C9J2C7 533 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 NRP1O14786 923 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 PPEF2O14830 753 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 CST3P01034 146 aaPredicted RBP16.05■□□□□ 0.16
CCNE1-202ENST00000357943 GALTP07902 379 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 LRPAP1P30533 357 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 GTF2H1P32780 548 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 SLC11A1P49279 550 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 AP3M2P53677 418 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 BCAR1P56945 870 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 BIRC3Q13489 604 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 MAN2A1Q16706 1144 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 ZACNQ401N2 412 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 MIIPQ5JXC2 388 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 APTXQ7Z2E3 356 aaKnown RBP16.05■□□□□ 0.16
CCNE1-202ENST00000357943 SPRED2Q7Z698 418 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 C3orf58Q8NDZ4 430 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 VPS16Q9H269 839 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 TMEM8AQ9HCN3 771 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 LIMA1Q9UHB6 759 aaKnown RBP16.05■□□□□ 0.16
CCNE1-202ENST00000357943 PRG3Q9Y2Y8 225 aaPredicted RBP16.05■□□□□ 0.16
CCNE1-202ENST00000357943 ANO9A1A5B4 782 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 PODXLO00592 558 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 AFPP02771 609 aaKnown RBP16.05■□□□□ 0.16
CCNE1-202ENST00000357943 ALDH2P05091 517 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 KRT19P08727 400 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 POLR2BP30876 1174 aaKnown RBP16.05■□□□□ 0.16
CCNE1-202ENST00000357943 FMO5P49326 533 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 MXI1P50539 228 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 TPM4P67936 248 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 C9orf57Q5W0N0 161 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 KRT39Q6A163 491 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 TMEM173Q86WV6 379 aaPredicted RBP16.05■□□□□ 0.16
CCNE1-202ENST00000357943 CLP1Q92989 425 aaKnown RBP16.05■□□□□ 0.16
CCNE1-202ENST00000357943 ITGA11Q9UKX5 1188 aa16.05■□□□□ 0.16
CCNE1-202ENST00000357943 PDCD11Q14690 1871 aaKnown RBP16.04■□□□□ 0.16
CCNE1-202ENST00000357943 TDRD15B5MCY1 1934 aaKnown RBP16.04■□□□□ 0.16
CCNE1-202ENST00000357943 A0A1W2PPC1 479 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 LRRC10BA6NIK2 292 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 PIRO00625 290 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 STX10O60499 249 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 LRRN2O75325 713 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 VNN1O95497 513 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 ITGB1P05556 798 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 ALDH7A1P49419 539 aaKnown RBP16.04■□□□□ 0.16
CCNE1-202ENST00000357943 VWA3BQ502W6 1294 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 KCNT2Q6UVM3 1135 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 TAS1R2Q8TE23 839 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms