RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 POLR2AP24928 1970 aaKnown RBP9.85□□□□□ -0.83
UPF2-202ENST00000357604 A0A1W2PPC1 479 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.85□□□□□ -0.83
UPF2-202ENST00000357604 ZNF354CQ86Y25 554 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 ADSSL1Q8N142 457 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 TTC16Q8NEE8 873 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 CPLX3Q8WVH0 158 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 CASP10Q92851 521 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 NKX2-4Q9H2Z4 354 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 PDZD7Q9H5P4 517 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 THG1LQ9NWX6 298 aaKnown RBP9.85□□□□□ -0.83
UPF2-202ENST00000357604 MAFFQ9ULX9 164 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 SLC8A2Q9UPR5 921 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 SNX9Q9Y5X1 595 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 ITGB3P05106 788 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 AKAP5P24588 427 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 ACADSBP45954 432 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 FANCCQ00597 558 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 RSRC2Q7L4I2 434 aaKnown RBP9.85□□□□□ -0.83
UPF2-202ENST00000357604 RIN2Q8WYP3 895 aaPredicted RBP9.85□□□□□ -0.83
UPF2-202ENST00000357604 SEPT5Q99719 369 aaPredicted RBP9.85□□□□□ -0.83
UPF2-202ENST00000357604 NIF3L1Q9GZT8 377 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 KATNBL1Q9H079 304 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 IGFLR1Q9H665 355 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 TLE6Q9H808 572 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 MTUS1Q9ULD2 1270 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 GREB1LQ9C091 1923 aaPredicted RBP9.85□□□□□ -0.83
UPF2-202ENST00000357604 TMEM150BA6NC51 233 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 CASTOR2A6NHX0 329 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 IFRD2Q12894 506 aaPredicted RBP9.85□□□□□ -0.83
UPF2-202ENST00000357604 NR1H3Q13133 447 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 TCP11X2Q5H9J9 407 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 PRPF38BQ5VTL8 546 aaKnown RBP9.85□□□□□ -0.83
UPF2-202ENST00000357604 HERC6Q8IVU3 1022 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 NSMCE1Q8WV22 266 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 ERVK-5Q9HDB9 667 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 NR2E1Q9Y466 385 aa9.85□□□□□ -0.83
UPF2-202ENST00000357604 GOLGA6L9A6NEM1 432 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 LACTBL1A8MY62 500 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 CXCL14O95715 111 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 TRIM72Q6ZMU5 477 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 CRYGNQ8WXF5 182 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 FGD4Q96M96 766 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 STIM2Q9P246 746 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.84□□□□□ -0.83
UPF2-202ENST00000357604 ADGRA3Q8IWK6 1321 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 A0A0U1RQF3 1178 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 PUS10Q3MIT2 529 aaKnown RBP9.84□□□□□ -0.83
UPF2-202ENST00000357604 COLGALT1Q8NBJ5 622 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 CCDC42Q96M95 316 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 GAD1Q99259 594 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 CDT1Q9H211 546 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 AKR1B15C9JRZ8 316 aaPredicted RBP9.84□□□□□ -0.83
UPF2-202ENST00000357604 ENPP3O14638 875 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 GLUD1P00367 558 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 CXCL8P10145 99 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 MAGEA10P43363 369 aaPredicted RBP9.84□□□□□ -0.83
UPF2-202ENST00000357604 NSFP46459 744 aaKnown RBP9.84□□□□□ -0.83
UPF2-202ENST00000357604 GCLMP48507 274 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 JADE1Q6IE81 842 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 ACSF2Q96CM8 615 aaPredicted RBP9.84□□□□□ -0.83
UPF2-202ENST00000357604 NT5C1AQ9BXI3 368 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 FZD8Q9H461 694 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 DONSONQ9NYP3 566 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 C2CD2LO14523 706 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 ZNF197O14709 1029 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 GPR32O75388 356 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 RTN3O95197 1032 aaPredicted RBP9.84□□□□□ -0.83
UPF2-202ENST00000357604 CD58P19256 250 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 TARBP2Q15633 366 aaKnown RBP9.84□□□□□ -0.83
UPF2-202ENST00000357604 NFIL3Q16649 462 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 MGAT5BQ3V5L5 792 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 OVOS1Q6IE37 1185 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 TOGARAM2Q6ZUX3 1019 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 NAA15Q9BXJ9 866 aaKnown RBP9.84□□□□□ -0.83
UPF2-202ENST00000357604 ZDHHC9Q9Y397 364 aa9.84□□□□□ -0.83
UPF2-202ENST00000357604 FAM237AA0A1B0GTK4 181 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 ARF4P18085 180 aaPredicted RBP9.83□□□□□ -0.84
UPF2-202ENST00000357604 KLHL30Q0D2K2 578 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 BMT2Q1RMZ1 405 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 PLEKHG4Q58EX7 1191 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 DCUN1D2Q6PH85 259 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 PDZD4Q76G19 769 aaPredicted RBP9.83□□□□□ -0.84
UPF2-202ENST00000357604 SNX27Q96L92 541 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 TTPALQ9BTX7 342 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 ADAMTS10Q9H324 1103 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 NDST4Q9H3R1 872 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 CDK7P50613 346 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 PSMD5Q16401 504 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 IL17AQ16552 155 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 CYP26C1Q6V0L0 522 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 C12orf56Q8IXR9 622 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 SMYD4Q8IYR2 804 aaPredicted RBP9.83□□□□□ -0.84
UPF2-202ENST00000357604 TOP6BLQ8N6T0 577 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 CTNNBL1Q8WYA6 563 aaPredicted RBP9.83□□□□□ -0.84
UPF2-202ENST00000357604 MAK16Q9BXY0 300 aaKnown RBP9.83□□□□□ -0.84
UPF2-202ENST00000357604 POLD4Q9HCU8 107 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 ST7Q9NRC1 585 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 ARHGAP28Q9P2N2 729 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 ZMYM5Q9UJ78 669 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms