RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 INTS13Q9NVM9 706 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 SPG21Q9NZD8 308 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 LZTS1Q9Y250 596 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 FAN1Q9Y2M0 1017 aa17.31■□□□□ 0.36
FDPS-201ENST00000356657 NFICP08651 508 aa17.3■□□□□ 0.36
FDPS-201ENST00000356657 TNNI1P19237 187 aa17.3■□□□□ 0.36
FDPS-201ENST00000356657 PNPLA4P41247 253 aa17.3■□□□□ 0.36
FDPS-201ENST00000356657 VAMP7P51809 220 aa17.3■□□□□ 0.36
FDPS-201ENST00000356657 STX17P56962 302 aa17.3■□□□□ 0.36
FDPS-201ENST00000356657 PLCB3Q01970 1234 aa17.3■□□□□ 0.36
FDPS-201ENST00000356657 MYL5Q02045 173 aa17.3■□□□□ 0.36
FDPS-201ENST00000356657 KRT17Q04695 432 aa17.3■□□□□ 0.36
FDPS-201ENST00000356657 ELAVL2Q12926 359 aaKnown RBP17.3■□□□□ 0.36
FDPS-201ENST00000356657 EPC2Q52LR7 807 aa17.3■□□□□ 0.36
FDPS-201ENST00000356657 ZNF576Q9H609 170 aa17.3■□□□□ 0.36
FDPS-201ENST00000356657 R3HCC1Q9Y3T6 440 aaKnown RBP17.3■□□□□ 0.36
FDPS-201ENST00000356657 ARHGEF37A1IGU5 675 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 TRAPPC3O43617 180 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 DLATP10515 647 aaKnown RBP17.29■□□□□ 0.36
FDPS-201ENST00000356657 OR1G1P47890 313 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 TFAMQ00059 246 aaKnown RBP17.29■□□□□ 0.36
FDPS-201ENST00000356657 UPP1Q16831 310 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 CCDC40Q4G0X9 1142 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 DCLRE1AQ6PJP8 1040 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 EFCAB13Q8IY85 973 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 SLC39A11Q8N1S5 342 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 FBXO22Q8NEZ5 403 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 CCDC127Q96BQ5 260 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 BORCS6Q96GS4 357 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 ZNF560Q96MR9 790 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 SRRTQ9BXP5 876 aaKnown RBP17.29■□□□□ 0.36
FDPS-201ENST00000356657 LMAN2LQ9H0V9 348 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 DNAJC25Q9H1X3 360 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 TTYH1Q9H313 450 aaPredicted RBP17.29■□□□□ 0.36
FDPS-201ENST00000356657 MTMR10Q9NXD2 777 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 DPP3Q9NY33 737 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 DNAJB4Q9UDY4 337 aa17.29■□□□□ 0.36
FDPS-201ENST00000356657 PUF60Q9UHX1 559 aaKnown RBP17.29■□□□□ 0.36
FDPS-201ENST00000356657 TRANK1O15050 2925 aa17.28■□□□□ 0.36
FDPS-201ENST00000356657 CHD7Q9P2D1 2997 aa17.28■□□□□ 0.36
FDPS-201ENST00000356657 PODXLO00592 558 aa17.28■□□□□ 0.36
FDPS-201ENST00000356657 NRP1O14786 923 aa17.28■□□□□ 0.36
FDPS-201ENST00000356657 SLC11A1P49279 550 aa17.28■□□□□ 0.36
FDPS-201ENST00000356657 BMS1Q14692 1282 aaKnown RBP17.28■□□□□ 0.36
FDPS-201ENST00000356657 ANO6Q4KMQ2 910 aa17.28■□□□□ 0.36
FDPS-201ENST00000356657 GPR65Q8IYL9 337 aa17.28■□□□□ 0.36
FDPS-201ENST00000356657 LRRC52Q8N7C0 313 aa17.28■□□□□ 0.36
FDPS-201ENST00000356657 IGSF21Q96ID5 467 aa17.28■□□□□ 0.36
FDPS-201ENST00000356657 TUBGCP4Q9UGJ1 667 aa17.28■□□□□ 0.36
FDPS-201ENST00000356657 ADAM28Q9UKQ2 775 aa17.28■□□□□ 0.36
FDPS-201ENST00000356657 SF3B1O75533 1304 aaKnown RBP eCLIP17.28■□□□□ 0.361e-6■■■■■ 29.6
FDPS-201ENST00000356657 ANO9A1A5B4 782 aa17.27■□□□□ 0.36
FDPS-201ENST00000356657 CASTOR2A6NHX0 329 aa17.27■□□□□ 0.36
FDPS-201ENST00000356657 LRRIQ3A6PVS8 624 aaPredicted RBP17.27■□□□□ 0.36
FDPS-201ENST00000356657 SMTNL1A8MU46 457 aa17.27■□□□□ 0.36
FDPS-201ENST00000356657 H3BNC9 293 aa17.27■□□□□ 0.36
FDPS-201ENST00000356657 B3GAT3O94766 335 aa17.27■□□□□ 0.36
FDPS-201ENST00000356657 EEF1GP26641 437 aaKnown RBP17.27■□□□□ 0.36
FDPS-201ENST00000356657 SOX4Q06945 474 aaPredicted RBP17.27■□□□□ 0.36
FDPS-201ENST00000356657 SPAG1Q07617 926 aa17.27■□□□□ 0.36
FDPS-201ENST00000356657 PDE12Q6L8Q7 609 aaKnown RBP17.27■□□□□ 0.36
FDPS-201ENST00000356657 C11orf57Q6ZUT1 292 aaPredicted RBP17.27■□□□□ 0.36
FDPS-201ENST00000356657 C18orf25Q96B23 403 aaPredicted RBP17.27■□□□□ 0.36
FDPS-201ENST00000356657 MED15Q96RN5 788 aa17.27■□□□□ 0.36
FDPS-201ENST00000356657 C17orf80Q9BSJ5 609 aa17.27■□□□□ 0.36
FDPS-201ENST00000356657 MTMR12Q9C0I1 747 aa17.27■□□□□ 0.36
FDPS-201ENST00000356657 CXCL16Q9H2A7 254 aa17.27■□□□□ 0.36
FDPS-201ENST00000356657 MAGEC2Q9UBF1 373 aaPredicted RBP17.27■□□□□ 0.36
FDPS-201ENST00000356657 NFE2L3Q9Y4A8 694 aa17.27■□□□□ 0.36
FDPS-201ENST00000356657 PMM2O15305 246 aa17.26■□□□□ 0.35
FDPS-201ENST00000356657 B4GALT3O60512 393 aa17.26■□□□□ 0.35
FDPS-201ENST00000356657 N4BP1O75113 896 aaKnown RBP17.26■□□□□ 0.35
FDPS-201ENST00000356657 FGF18O76093 207 aa17.26■□□□□ 0.35
FDPS-201ENST00000356657 ZNF165P49910 485 aa17.26■□□□□ 0.35
FDPS-201ENST00000356657 CLCNKBP51801 687 aa17.26■□□□□ 0.35
FDPS-201ENST00000356657 WNT7BP56706 349 aa17.26■□□□□ 0.35
FDPS-201ENST00000356657 RBP5P82980 135 aa17.26■□□□□ 0.35
FDPS-201ENST00000356657 C9orf57Q5W0N0 161 aa17.26■□□□□ 0.35
FDPS-201ENST00000356657 DDX53Q86TM3 631 aaKnown RBP17.26■□□□□ 0.35
FDPS-201ENST00000356657 GZF1Q9H116 711 aaPredicted RBP17.26■□□□□ 0.35
FDPS-201ENST00000356657 TMEM8AQ9HCN3 771 aa17.26■□□□□ 0.35
FDPS-201ENST00000356657 HCSTQ9UBK5 93 aa17.26■□□□□ 0.35
FDPS-201ENST00000356657 PRG3Q9Y2Y8 225 aaPredicted RBP17.26■□□□□ 0.35
FDPS-201ENST00000356657 PLXNA4Q9HCM2 1894 aa17.26■□□□□ 0.35
FDPS-201ENST00000356657 PIRO00625 290 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 P4HA2O15460 535 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 TADA2AO75478 443 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 ARHGEF15O94989 841 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 ATICP31939 592 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 MYO1EQ12965 1108 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 ZACNQ401N2 412 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 SV2CQ496J9 727 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 KRT39Q6A163 491 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 PDXDC1Q6P996 788 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 LRSAM1Q6UWE0 723 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 TRAPPC11Q7Z392 1133 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 TRIM59Q8IWR1 403 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 C1orf127Q8N9H9 656 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 KLHL23Q8NBE8 558 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 ANKRD20A12PQ8NF67 263 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms