RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 ZNF12P17014 697 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 VCLP18206 1134 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 ARFIP2P53365 341 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 PFKPQ01813 784 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 PPP2R5CQ13362 524 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 PDK3Q15120 406 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 CLEC16AQ2KHT3 1053 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 RBM44Q6ZP01 1051 aaKnown RBP8.16□□□□□ -1.1
CCR9-201ENST00000355983 TRIM67Q6ZTA4 783 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 FRMD5Q7Z6J6 570 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 RASSF3Q86WH2 238 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 SRRM1Q8IYB3 904 aaKnown RBP8.16□□□□□ -1.1
CCR9-201ENST00000355983 SYT2Q8N9I0 419 aaPredicted RBP8.16□□□□□ -1.1
CCR9-201ENST00000355983 OLIG1Q8TAK6 271 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 SLC35G2Q8TBE7 412 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 DTX3LQ8TDB6 740 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 JADE3Q92613 823 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 SYT11Q9BT88 431 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 CRNKL1Q9BZJ0 848 aaKnown RBP8.16□□□□□ -1.1
CCR9-201ENST00000355983 KLHL4Q9C0H6 718 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 NACA2Q9H009 215 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 KANSL3Q9P2N6 904 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 PLA2G4CQ9UP65 541 aa8.16□□□□□ -1.1
CCR9-201ENST00000355983 hCG_2014768A0A024R1R8 64 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 MYMKA6NI61 221 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 RASA4BC9J798 803 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 RASA4O43374 803 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 PDE8AO60658 829 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 SPAG7O75391 227 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 MTA2O94776 668 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 CLPTM1O96005 669 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 CD48P09326 243 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 ESRRAP11474 423 aaPredicted RBP8.15□□□□□ -1.1
CCR9-201ENST00000355983 PPIDQ08752 370 aaKnown RBP8.15□□□□□ -1.1
CCR9-201ENST00000355983 TRIM28Q13263 835 aaKnown RBP8.15□□□□□ -1.1
CCR9-201ENST00000355983 PTK6Q13882 451 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 ZNF423Q2M1K9 1284 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 TMEM266Q2M3C6 531 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 SEL1L2Q5TEA6 688 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 TCERG1LQ5VWI1 586 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 LRRC8BQ6P9F7 803 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 DHDDSQ86SQ9 333 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 NOP9Q86U38 636 aaKnown RBP8.15□□□□□ -1.1
CCR9-201ENST00000355983 TREML1Q86YW5 311 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 PYROXD1Q8WU10 500 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 ZNF75CPQ92670 426 aaPredicted RBP8.15□□□□□ -1.1
CCR9-201ENST00000355983 SNF8Q96H20 258 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 ZSWIM1Q9BR11 485 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 ZKSCAN3Q9BRR0 538 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 MXD3Q9BW11 206 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 WNT8AQ9H1J5 351 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 Q9H521 79 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 BLOC1S4Q9NUP1 217 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 UBAP1Q9NZ09 502 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 NINJ2Q9NZG7 142 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 UVRAGQ9P2Y5 699 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 FETUBQ9UGM5 382 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 RTCBQ9Y3I0 505 aaKnown RBP8.15□□□□□ -1.1
CCR9-201ENST00000355983 TOGARAM1Q9Y4F4 1720 aa8.15□□□□□ -1.1
CCR9-201ENST00000355983 SOBPA7XYQ1 873 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 PLCG2P16885 1265 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 CETN2P41208 172 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 CEBPAP49715 358 aaPredicted RBP8.15□□□□□ -1.11
CCR9-201ENST00000355983 CCT8P50990 548 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 APOFQ13790 326 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 SIX1Q15475 284 aaPredicted RBP8.15□□□□□ -1.11
CCR9-201ENST00000355983 RWDD4Q6NW29 188 aaKnown RBP8.15□□□□□ -1.11
CCR9-201ENST00000355983 CENPUQ71F23 418 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 SCYL3Q8IZE3 742 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 OGFOD1Q8N543 542 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 UHMK1Q8TAS1 419 aaKnown RBP8.15□□□□□ -1.11
CCR9-201ENST00000355983 BHMTQ93088 406 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 EFHD2Q96C19 240 aaPredicted RBP8.15□□□□□ -1.11
CCR9-201ENST00000355983 COX4I2Q96KJ9 171 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 TRIM55Q9BYV6 548 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 VPS11Q9H270 941 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 MLXIPLQ9NP71 852 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 ZNF180Q9UJW8 692 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 TTLL3Q9Y4R7 772 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 AK5Q9Y6K8 562 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 ROBO3Q96MS0 1386 aa8.15□□□□□ -1.11
CCR9-201ENST00000355983 FAM205AQ6ZU69 1335 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 A0A1W2PRG0 241 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 ANKRD62A6NC57 917 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 GOLGA8TH3BQL2 631 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 TRAF5O00463 557 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 TYROBPO43914 113 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 KRT38O76015 456 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 ACSL3O95573 720 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 GOLGA8HP0CJ92 632 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 PYGMP11217 842 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 PTPN2P17706 415 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 PPARGP37231 505 aaPredicted RBP8.14□□□□□ -1.11
CCR9-201ENST00000355983 FXR2P51116 673 aaKnown RBP eCLIP8.14□□□□□ -1.11
CCR9-201ENST00000355983 NR1H2P55055 460 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 KCNC4Q03721 635 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 MSLNQ13421 630 aaPredicted RBP8.14□□□□□ -1.11
CCR9-201ENST00000355983 DEPDC1Q5TB30 811 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 MFSD4BQ5TF39 518 aa8.14□□□□□ -1.11
CCR9-201ENST00000355983 RIPOR1Q6ZS17 1223 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms