RNA–Protein interactions for RNA: ENST00000355396.7

SUSD1-201, Transcript of sushi domain containing 1, humanhuman

APPRIS ALT2 TSL 2

Gene SUSD1, Length 2,861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-201ENST00000355396 PAX3P23760 479 aa12.52□□□□□ -0.41
SUSD1-201ENST00000355396 RPL9P32969 192 aaKnown RBP12.52□□□□□ -0.41
SUSD1-201ENST00000355396 CLCN1P35523 988 aa12.52□□□□□ -0.41
SUSD1-201ENST00000355396 DLG4P78352 724 aa12.52□□□□□ -0.41
SUSD1-201ENST00000355396 SOX4Q06945 474 aaPredicted RBP12.52□□□□□ -0.41
SUSD1-201ENST00000355396 FAM109BQ6ICB4 259 aaPredicted RBP12.52□□□□□ -0.41
SUSD1-201ENST00000355396 KIF12Q96FN5 646 aa12.52□□□□□ -0.41
SUSD1-201ENST00000355396 YME1L1Q96TA2 773 aa12.52□□□□□ -0.41
SUSD1-201ENST00000355396 LIMA1Q9UHB6 759 aaKnown RBP12.52□□□□□ -0.41
SUSD1-201ENST00000355396 TLL1O43897 1013 aa12.52□□□□□ -0.41
SUSD1-201ENST00000355396 B4GALT3O60512 393 aa12.52□□□□□ -0.41
SUSD1-201ENST00000355396 SPAG1Q07617 926 aa12.52□□□□□ -0.41
SUSD1-201ENST00000355396 TPD52L1Q16890 204 aaPredicted RBP12.52□□□□□ -0.41
SUSD1-201ENST00000355396 DUOXA2Q1HG44 320 aa12.52□□□□□ -0.41
SUSD1-201ENST00000355396 TCP11X2Q5H9J9 407 aa12.52□□□□□ -0.41
SUSD1-201ENST00000355396 EEF2KMTQ96G04 330 aa12.52□□□□□ -0.41
SUSD1-201ENST00000355396 DDX27Q96GQ7 796 aaKnown RBP12.52□□□□□ -0.41
SUSD1-201ENST00000355396 FNBP1Q96RU3 617 aa12.52□□□□□ -0.41
SUSD1-201ENST00000355396 COQ4Q9Y3A0 265 aa12.52□□□□□ -0.41
SUSD1-201ENST00000355396 PIRO00625 290 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 P4HA2O15460 535 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 POMCP01189 267 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 RAB30Q15771 203 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 ZACNQ401N2 412 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 APTXQ7Z2E3 356 aaKnown RBP12.51□□□□□ -0.41
SUSD1-201ENST00000355396 ZNF280BQ86YH2 543 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 BEST2Q8NFU1 509 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 OR5B17Q8NGF7 314 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 ITGA11Q9UKX5 1188 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 MRPL42Q9Y6G3 142 aaKnown RBP12.51□□□□□ -0.41
SUSD1-201ENST00000355396 NLRC5Q86WI3 1866 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 KCNJ18B7U540 433 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 STAU1O95793 577 aaKnown RBP12.51□□□□□ -0.41
SUSD1-201ENST00000355396 BTG3Q14201 252 aaPredicted RBP12.51□□□□□ -0.41
SUSD1-201ENST00000355396 KCNJ12Q14500 433 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 UPP1Q16831 310 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 CCDC40Q4G0X9 1142 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 FIBCD1Q8N539 461 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 TMEM8AQ9HCN3 771 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 INPP5FQ9Y2H2 1132 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 RWDD3Q9Y3V2 267 aa12.51□□□□□ -0.41
SUSD1-201ENST00000355396 C5orf67F2Z3F1 127 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 LAG3P18627 525 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 PPP3CAQ08209 521 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 GLRA4Q5JXX5 417 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 CD300LGQ6UXG3 332 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 C1orf127Q8N9H9 656 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 C18orf25Q96B23 403 aaPredicted RBP12.5□□□□□ -0.41
SUSD1-201ENST00000355396 CCDC127Q96BQ5 260 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 ANKRD36BP1Q96IX9 119 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 SAMD11Q96NU1 681 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 POP1Q99575 1024 aaKnown RBP12.5□□□□□ -0.41
SUSD1-201ENST00000355396 PBX4Q9BYU1 374 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 DPP3Q9NY33 737 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 TUBGCP4Q9UGJ1 667 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 SIX4Q9UIU6 781 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 COLQQ9Y215 455 aaPredicted RBP12.5□□□□□ -0.41
SUSD1-201ENST00000355396 LINC01553A4QN01 128 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 GRXCR1A8MXD5 290 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 SLC34A2O95436 690 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 GALTP07902 379 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 AARSP49588 968 aaKnown RBP eCLIP12.5□□□□□ -0.41
SUSD1-201ENST00000355396 MAN2A1Q16706 1144 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 MIIPQ5JXC2 388 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 TRAPPC11Q7Z392 1133 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 XPO4Q9C0E2 1151 aaKnown RBP12.5□□□□□ -0.41
SUSD1-201ENST00000355396 VRTNQ9H8Y1 702 aa12.5□□□□□ -0.41
SUSD1-201ENST00000355396 YBX2Q9Y2T7 364 aaKnown RBP12.5□□□□□ -0.41
SUSD1-201ENST00000355396 LCHNA4D1U4 455 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 ZNF500O60304 480 aaPredicted RBP12.49□□□□□ -0.41
SUSD1-201ENST00000355396 TNNI1P19237 187 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 RABGGTBP53611 331 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 C9orf57Q5W0N0 161 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 FAM117BQ6P1L5 589 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 DCLRE1AQ6PJP8 1040 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 SV2AQ7L0J3 742 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 LRRC52Q8N7C0 313 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 PLVAPQ9BX97 442 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 MTMR12Q9C0I1 747 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 MAGEC2Q9UBF1 373 aaPredicted RBP12.49□□□□□ -0.41
SUSD1-201ENST00000355396 DNAJB4Q9UDY4 337 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 GTPBP10A4D1E9 387 aaKnown RBP12.49□□□□□ -0.41
SUSD1-201ENST00000355396 N4BP1O75113 896 aaKnown RBP12.49□□□□□ -0.41
SUSD1-201ENST00000355396 TNNC2P02585 160 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 TMEM191BP0C7N4 346 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 DLATP10515 647 aaKnown RBP12.49□□□□□ -0.41
SUSD1-201ENST00000355396 ERVK-21P61565 698 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 KRT31Q15323 416 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 PAN2Q504Q3 1202 aaKnown RBP12.49□□□□□ -0.41
SUSD1-201ENST00000355396 TDRD10Q5VZ19 366 aaKnown RBP12.49□□□□□ -0.41
SUSD1-201ENST00000355396 KRT39Q6A163 491 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 SMYD5Q6GMV2 418 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 CCDC186Q7Z3E2 898 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 RNF168Q8IYW5 571 aaPredicted RBP12.49□□□□□ -0.41
SUSD1-201ENST00000355396 COLGALT1Q8NBJ5 622 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 FAXDC2Q96IV6 333 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 TUBGCP2Q9BSJ2 902 aa12.49□□□□□ -0.41
SUSD1-201ENST00000355396 IFNKQ9P0W0 207 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms