RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 GPR149Q86SP6 731 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 SUGP1Q8IWZ8 645 aaKnown RBP12.58□□□□□ -0.4
CDRT1-202ENST00000354433 KCTD17Q8N5Z5 321 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 ACSF2Q96CM8 615 aaPredicted RBP12.58□□□□□ -0.4
CDRT1-202ENST00000354433 BICD1Q96G01 975 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 MFSD14AQ96MC6 490 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 ACO2Q99798 780 aaKnown RBP12.58□□□□□ -0.4
CDRT1-202ENST00000354433 TTPALQ9BTX7 342 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 CXCL16Q9H2A7 254 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 TMEM134Q9H6X4 195 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 CHST7Q9NS84 486 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 MAN1B1Q9UKM7 699 aa12.58□□□□□ -0.4
CDRT1-202ENST00000354433 TDRD15B5MCY1 1934 aaKnown RBP12.58□□□□□ -0.4
CDRT1-202ENST00000354433 TMEM221A6NGB7 291 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 M0R296 226 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 BIN1O00499 593 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 B3GAT3O94766 335 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 PRR29P0C7W0 189 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 SPATA31D3P0C874 917 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 PLS3P13797 630 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 PLA2G5P39877 138 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 SLC12A3P55017 1021 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 SIGLEC14Q08ET2 396 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 ELAVL2Q12926 359 aaKnown RBP12.57□□□□□ -0.4
CDRT1-202ENST00000354433 MTMR3Q13615 1198 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 TMEM119Q4V9L6 283 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 PRSS55Q6UWB4 352 aaPredicted RBP12.57□□□□□ -0.4
CDRT1-202ENST00000354433 MPZL3Q6UWV2 235 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 C15orf39Q6ZRI6 1047 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 SPATA31D4Q6ZUB0 917 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.57□□□□□ -0.4
CDRT1-202ENST00000354433 FEZF2Q8TBJ5 459 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 PBXIP1Q96AQ6 731 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 ZHX3Q9H4I2 956 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 PIDD1Q9HB75 910 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 GOLGA2P5Q9HBQ8 144 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 RXFP1Q9HBX9 757 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 KCND2Q9NZV8 630 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 LARSQ9P2J5 1176 aaKnown RBP12.57□□□□□ -0.4
CDRT1-202ENST00000354433 KCNG1Q9UIX4 513 aa12.57□□□□□ -0.4
CDRT1-202ENST00000354433 NPHP3-ACAD11A0A0J9YXS1 232 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 CCDC195A0A1B0GUA6 201 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 TGM5O43548 720 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 RFPL2O75678 378 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 ASGR2P07307 311 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 GRM5P41594 1212 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 CLCNKBP51801 687 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 KARSQ15046 597 aaKnown RBP12.56□□□□□ -0.4
CDRT1-202ENST00000354433 PSMD5Q16401 504 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 TAS1R3Q7RTX0 852 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 GPBP1Q86WP2 473 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 AOPEPQ8N6M6 819 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 KREMEN2Q8NCW0 462 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 SPIRE2Q8WWL2 714 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 ACAP3Q96P50 834 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 RMND1Q9NWS8 449 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 SORCS3Q9UPU3 1222 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 USTQ9Y2C2 406 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.56□□□□□ -0.4
CDRT1-202ENST00000354433 H0YCG3 227 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 K7ENM7 598 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 AP5Z1O43299 807 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 FAM13AO94988 1023 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 EFEMP2O95967 443 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 MCF2P10911 925 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 PLCG1P19174 1290 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 ERCC5P28715 1186 aaPredicted RBP12.56□□□□□ -0.4
CDRT1-202ENST00000354433 CDC25BP30305 580 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 NOLC1Q14978 699 aaKnown RBP eCLIP12.56□□□□□ -0.4
CDRT1-202ENST00000354433 NAB2Q15742 525 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 LIN9Q5TKA1 542 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 OTOP3Q7RTS5 596 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 PLCD3Q8N3E9 789 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 SMG7Q92540 1137 aaKnown RBP12.56□□□□□ -0.4
CDRT1-202ENST00000354433 STAMQ92783 540 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 UROC1Q96N76 676 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 PPP1R10Q96QC0 940 aaKnown RBP12.56□□□□□ -0.4
CDRT1-202ENST00000354433 REEP2Q9BRK0 252 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 GTPBP4Q9BZE4 634 aaKnown RBP12.56□□□□□ -0.4
CDRT1-202ENST00000354433 SLC38A7Q9NVC3 462 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 KBTBD4Q9NVX7 518 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 FNIP2Q9P278 1114 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 STK17AQ9UEE5 414 aa12.56□□□□□ -0.4
CDRT1-202ENST00000354433 TBCAO75347 108 aaKnown RBP12.55□□□□□ -0.4
CDRT1-202ENST00000354433 TOM1L1O75674 476 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 TPM3P06753 285 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 GBP2P32456 591 aaPredicted RBP12.55□□□□□ -0.4
CDRT1-202ENST00000354433 AFMP43652 599 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 ZNF75DP51815 510 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 MYL5Q02045 173 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 NCAPHQ15003 741 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 PDXDC1Q6P996 788 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.55□□□□□ -0.4
CDRT1-202ENST00000354433 GRAMD1CQ8IYS0 662 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 MYCT1Q8N699 235 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 TMEM161BQ8NDZ6 487 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 CMASQ8NFW8 434 aaPredicted RBP12.55□□□□□ -0.4
CDRT1-202ENST00000354433 PIK3R5Q8WYR1 880 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 MRFAP1L1Q96HT8 127 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 ZBTB45Q96K62 511 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms