RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 KCNK9Q9NPC2 374 aa26.12■■□□□ 1.77
CPNE1-202ENST00000352393 ATP9AO75110 1047 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 NQO1P15559 274 aaKnown RBP26.11■■□□□ 1.77
CPNE1-202ENST00000352393 EIF2AK2P19525 551 aaKnown RBP26.11■■□□□ 1.77
CPNE1-202ENST00000352393 SFNP31947 248 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 ADCY8P40145 1251 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 ZNF268Q14587 947 aaPredicted RBP26.11■■□□□ 1.77
CPNE1-202ENST00000352393 PGM5Q15124 567 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 C15orf39Q6ZRI6 1047 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 TRMT1LQ7Z2T5 733 aaKnown RBP26.11■■□□□ 1.77
CPNE1-202ENST00000352393 RELL1Q8IUW5 271 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 CYP4X1Q8N118 509 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 POMGNT1Q8WZA1 660 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 PWWP2AQ96N64 755 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 ECT2Q9H8V3 914 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 MLXIPLQ9NP71 852 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 PRKAG3Q9UGI9 489 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 EPB41L3Q9Y2J2 1087 aaPredicted RBP26.11■■□□□ 1.77
CPNE1-202ENST00000352393 ARL2BPQ9Y2Y0 163 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 PROSCO94903 275 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 BNIP1Q12981 228 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 MKRN3Q13064 507 aaKnown RBP26.11■■□□□ 1.77
CPNE1-202ENST00000352393 LLGL2Q6P1M3 1020 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 ANO5Q75V66 913 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 GPD1LQ8N335 351 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 CPA5Q8WXQ8 436 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 FAM212AQ96EL1 285 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 PLCD4Q9BRC7 762 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 NTPCRQ9BSD7 190 aaKnown RBP26.11■■□□□ 1.77
CPNE1-202ENST00000352393 C1orf112Q9NSG2 853 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 EURLQ9NYK6 297 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 GGT7Q9UJ14 662 aa26.11■■□□□ 1.77
CPNE1-202ENST00000352393 CYP1A1P04798 512 aaPredicted RBP26.1■■□□□ 1.77
CPNE1-202ENST00000352393 CLTAP09496 248 aa26.1■■□□□ 1.77
CPNE1-202ENST00000352393 RALAP11233 206 aa26.1■■□□□ 1.77
CPNE1-202ENST00000352393 KCNJ2P63252 427 aa26.1■■□□□ 1.77
CPNE1-202ENST00000352393 KRT76Q01546 638 aa26.1■■□□□ 1.77
CPNE1-202ENST00000352393 DLGAP5Q15398 846 aa26.1■■□□□ 1.77
CPNE1-202ENST00000352393 MON1BQ7L1V2 547 aa26.1■■□□□ 1.77
CPNE1-202ENST00000352393 GDAP1Q8TB36 358 aa26.1■■□□□ 1.77
CPNE1-202ENST00000352393 TAAR1Q96RJ0 339 aa26.1■■□□□ 1.77
CPNE1-202ENST00000352393 TMEM39BQ9GZU3 492 aa26.1■■□□□ 1.77
CPNE1-202ENST00000352393 PCDHB2Q9Y5E7 798 aa26.1■■□□□ 1.77
CPNE1-202ENST00000352393 PSTPIP1O43586 416 aa26.09■■□□□ 1.77
CPNE1-202ENST00000352393 CDH16O75309 829 aa26.09■■□□□ 1.77
CPNE1-202ENST00000352393 ALADP13716 330 aa26.09■■□□□ 1.77
CPNE1-202ENST00000352393 CHRNA5P30532 468 aa26.09■■□□□ 1.77
CPNE1-202ENST00000352393 CCNG2Q16589 344 aa26.09■■□□□ 1.77
CPNE1-202ENST00000352393 RSBN1LQ6PCB5 846 aaPredicted RBP26.09■■□□□ 1.77
CPNE1-202ENST00000352393 PNMA8AQ86V59 439 aaPredicted RBP26.09■■□□□ 1.77
CPNE1-202ENST00000352393 BBOF1Q8ND07 529 aa26.09■■□□□ 1.77
CPNE1-202ENST00000352393 ACTL7BQ9Y614 415 aa26.09■■□□□ 1.77
CPNE1-202ENST00000352393 VPS41P49754 854 aa26.09■■□□□ 1.77
CPNE1-202ENST00000352393 CGB2Q6NT52 195 aa26.09■■□□□ 1.77
CPNE1-202ENST00000352393 TLDC1Q6P9B6 456 aa26.09■■□□□ 1.77
CPNE1-202ENST00000352393 SAMD3Q8N6K7 520 aa26.09■■□□□ 1.77
CPNE1-202ENST00000352393 FAM84AQ96KN4 292 aa26.09■■□□□ 1.77
CPNE1-202ENST00000352393 TGS1Q96RS0 853 aaKnown RBP26.09■■□□□ 1.77
CPNE1-202ENST00000352393 GARTP22102 1010 aa26.08■■□□□ 1.77
CPNE1-202ENST00000352393 NSFP46459 744 aaKnown RBP26.08■■□□□ 1.77
CPNE1-202ENST00000352393 COPS2P61201 443 aa26.08■■□□□ 1.77
CPNE1-202ENST00000352393 DAB2IPQ5VWQ8 1189 aa26.08■■□□□ 1.77
CPNE1-202ENST00000352393 PHLDB2Q86SQ0 1253 aa26.08■■□□□ 1.77
CPNE1-202ENST00000352393 CNKSR1Q969H4 720 aa26.08■■□□□ 1.77
CPNE1-202ENST00000352393 MAGEB18Q96M61 343 aa26.08■■□□□ 1.77
CPNE1-202ENST00000352393 C17orf75Q9HAS0 396 aa26.08■■□□□ 1.77
CPNE1-202ENST00000352393 MAP3K20Q9NYL2 800 aaKnown RBP26.08■■□□□ 1.77
CPNE1-202ENST00000352393 NAALADL1Q9UQQ1 740 aa26.08■■□□□ 1.77
CPNE1-202ENST00000352393 PLSCR1O15162 318 aa26.08■■□□□ 1.76
CPNE1-202ENST00000352393 IZUMO3Q5VZ72 239 aa26.08■■□□□ 1.76
CPNE1-202ENST00000352393 CCDC89Q8N998 374 aa26.08■■□□□ 1.76
CPNE1-202ENST00000352393 SUPT20HQ8NEM7 779 aa26.08■■□□□ 1.76
CPNE1-202ENST00000352393 FLAD1Q8NFF5 587 aa26.08■■□□□ 1.76
CPNE1-202ENST00000352393 N4BP2L2Q92802 583 aaPredicted RBP26.08■■□□□ 1.76
CPNE1-202ENST00000352393 GMLQ99445 158 aa26.08■■□□□ 1.76
CPNE1-202ENST00000352393 HEMGNQ9BXL5 484 aa26.08■■□□□ 1.76
CPNE1-202ENST00000352393 ZNF341Q9BYN7 854 aa26.08■■□□□ 1.76
CPNE1-202ENST00000352393 TCEAL9Q9UHQ7 104 aa26.08■■□□□ 1.76
CPNE1-202ENST00000352393 ASNSP08243 561 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 FDX1P10109 184 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 STX2P32856 288 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 RPS6P62753 249 aaKnown RBP26.07■■□□□ 1.76
CPNE1-202ENST00000352393 STAT4Q14765 748 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 ZKSCAN8Q15776 578 aaPredicted RBP26.07■■□□□ 1.76
CPNE1-202ENST00000352393 TMEM63BQ5T3F8 832 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 FKBP1CQ5VVH2 108 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 ARHGEF18Q6ZSZ5 1173 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 RHOT1Q8IXI2 618 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 KATNAL2Q8IYT4 538 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 CPXCR1Q8N123 301 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 CCHCR1Q8TD31 782 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 ZNF516Q92618 1163 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 VEZTQ9HBM0 779 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 RXFP1Q9HBX9 757 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 RAVER2Q9HCJ3 691 aaKnown RBP26.07■■□□□ 1.76
CPNE1-202ENST00000352393 HOMER2Q9NSB8 354 aa26.07■■□□□ 1.76
CPNE1-202ENST00000352393 IGF2BP3O00425 579 aaKnown RBP eCLIP26.06■■□□□ 1.762e-7■■■■□ 20.3
CPNE1-202ENST00000352393 HNRNPDLO14979 420 aaKnown RBP26.06■■□□□ 1.76
CPNE1-202ENST00000352393 ABHD2P08910 425 aa26.06■■□□□ 1.76
CPNE1-202ENST00000352393 IBSPP21815 317 aaPredicted RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms