RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 GBA2Q9HCG7 927 aaPredicted RBP21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 PSD3Q9NYI0 1048 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 ERAP1Q9NZ08 941 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 FAM153AQ9UHL3 310 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 NUB1Q9Y5A7 615 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 GOLGA6L10A0A0M3HER8 536 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 ASAP2O43150 1006 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 CYP1A1P04798 512 aaPredicted RBP21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 GJB1P08034 283 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 MYBL1P10243 752 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 PROZP22891 400 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 PTENP60484 403 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 POU5F1Q01860 360 aaKnown RBP21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 LAMC2Q13753 1193 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 SURF1Q15526 300 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 EFCAB12Q6NXP0 572 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 TSHZ1Q6ZSZ6 1077 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 TRIM11Q96F44 468 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 IMPG2Q9BZV3 1241 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 FZD8Q9H461 694 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 AVENQ9NQS1 362 aaPredicted RBP21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 CPSF3Q9UKF6 684 aaKnown RBP21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 NR2E1Q9Y466 385 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 PCDHB4Q9Y5E5 795 aa21.79■■□□□ 1.08
CHRNA3-202ENST00000348639 CCDC66A2RUB6 948 aa21.78■■□□□ 1.08
CHRNA3-202ENST00000348639 ACKR2O00590 384 aa21.78■■□□□ 1.08
CHRNA3-202ENST00000348639 CTNNA2P26232 953 aa21.78■■□□□ 1.08
CHRNA3-202ENST00000348639 CTNNA1P35221 906 aaKnown RBP21.78■■□□□ 1.08
CHRNA3-202ENST00000348639 CENPCQ03188 943 aa21.78■■□□□ 1.08
CHRNA3-202ENST00000348639 TAPT1Q6NXT6 567 aa21.78■■□□□ 1.08
CHRNA3-202ENST00000348639 BTBD6Q96KE9 485 aa21.78■■□□□ 1.08
CHRNA3-202ENST00000348639 NLRP4Q96MN2 994 aa21.78■■□□□ 1.08
CHRNA3-202ENST00000348639 PTPRHQ9HD43 1115 aa21.78■■□□□ 1.08
CHRNA3-202ENST00000348639 SPOPO43791 374 aa21.77■■□□□ 1.08
CHRNA3-202ENST00000348639 HSPA6P17066 643 aa21.77■■□□□ 1.08
CHRNA3-202ENST00000348639 MARCKSL1P49006 195 aa21.77■■□□□ 1.08
CHRNA3-202ENST00000348639 IGBP1P78318 339 aa21.77■■□□□ 1.08
CHRNA3-202ENST00000348639 TMEM270Q6UE05 265 aa21.77■■□□□ 1.08
CHRNA3-202ENST00000348639 MPZL3Q6UWV2 235 aa21.77■■□□□ 1.08
CHRNA3-202ENST00000348639 TRIM72Q6ZMU5 477 aa21.77■■□□□ 1.08
CHRNA3-202ENST00000348639 RIN2Q8WYP3 895 aaPredicted RBP21.77■■□□□ 1.08
CHRNA3-202ENST00000348639 SEC14L1Q92503 715 aa21.77■■□□□ 1.08
CHRNA3-202ENST00000348639 RNPEPQ9H4A4 650 aa21.77■■□□□ 1.08
CHRNA3-202ENST00000348639 VTA1Q9NP79 307 aa21.77■■□□□ 1.08
CHRNA3-202ENST00000348639 PCDHA3Q9Y5H8 950 aa21.77■■□□□ 1.08
CHRNA3-202ENST00000348639 HSF2BPO75031 334 aa21.77■■□□□ 1.07
CHRNA3-202ENST00000348639 ASS1P00966 412 aaKnown RBP21.77■■□□□ 1.07
CHRNA3-202ENST00000348639 ECHS1P30084 290 aa21.77■■□□□ 1.07
CHRNA3-202ENST00000348639 ZNF484Q5JVG2 852 aa21.77■■□□□ 1.07
CHRNA3-202ENST00000348639 NAA35Q5VZE5 725 aa21.77■■□□□ 1.07
CHRNA3-202ENST00000348639 ABRAQ8N0Z2 381 aa21.77■■□□□ 1.07
CHRNA3-202ENST00000348639 CPA5Q8WXQ8 436 aa21.77■■□□□ 1.07
CHRNA3-202ENST00000348639 PCNTO95613 3336 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 UMODL1Q5DID0 1318 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 TTI1O43156 1089 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 STRNO43815 780 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 CELF2O95319 508 aaKnown RBP21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 C22orf31O95567 290 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 CST3P01034 146 aaPredicted RBP21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 GH1P01241 217 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 GNA15P30679 374 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 NSFP46459 744 aaKnown RBP21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 GCLCP48506 637 aaPredicted RBP21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 CLCN3P51790 818 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 DUOXA2Q1HG44 320 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 ATF7IP2Q5U623 682 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 ANKRD23Q86SG2 305 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 C2orf69Q8N8R5 385 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 RBBP8NLQ8NC74 664 aaPredicted RBP21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 CYFIP2Q96F07 1278 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 SH3GL2Q99962 352 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 NFKBIZQ9BYH8 718 aa21.76■■□□□ 1.07
CHRNA3-202ENST00000348639 RBM47A0AV96 593 aaKnown RBP21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 INO80B-WBP1J3KQ70 363 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 LGALS2P05162 132 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 GUCY2FP51841 1108 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 HLTFQ14527 1009 aaKnown RBP eCLIP21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 SEL1L2Q5TEA6 688 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 MAMDC4Q6UXC1 1216 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 DPP9Q86TI2 863 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 INO80BQ9C086 356 aaPredicted RBP21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 MTMR12Q9C0I1 747 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 UTP11Q9Y3A2 253 aaKnown RBP21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 PLXNB2O15031 1838 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 PLXNA1Q9UIW2 1896 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 OPA1O60313 960 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 ADCYAP1R1P41586 468 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 MBTD1Q05BQ5 628 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 AADACL2Q6P093 401 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 MON1BQ7L1V2 547 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 ZNF467Q7Z7K2 595 aaPredicted RBP21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 UBR7Q8N806 425 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 PPTC7Q8NI37 304 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 FAM212AQ96EL1 285 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 FAM204AQ9H8W3 233 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 RRAGCQ9HB90 399 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 ERVK-5Q9HDB9 667 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 MORF4L1Q9UBU8 362 aa21.75■■□□□ 1.07
CHRNA3-202ENST00000348639 INSRRP14616 1297 aa21.74■■□□□ 1.07
CHRNA3-202ENST00000348639 MAPK4P31152 587 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms