RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 GLYCTKQ8IVS8 523 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 B3GALT6Q96L58 329 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 ZMAT2Q96NC0 199 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 S1PR5Q9H228 398 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 ASB7Q9H672 318 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 MAN1C1Q9NR34 630 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 CPSF3Q9UKF6 684 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 DERAQ9Y315 318 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 ZDHHC9Q9Y397 364 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 STYXL1Q9Y6J8 313 aa17.14■□□□□ 0.33
TSPAN4-201ENST00000346501 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 PVALEFA0A1B0GWK0 134 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 LACTBL1A8MY62 500 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 H7C4K7 107 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 SYN3O14994 580 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 EIF3DO15371 548 aaKnown RBP eCLIP17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 PPP1R37O75864 691 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 IL18RAPO95256 599 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 MYBP10242 640 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 GARTP22102 1010 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 SYKP43405 635 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 ACOT2P49753 483 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 SOX4Q06945 474 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 ENOX2Q16206 610 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 RTP2Q5QGT7 225 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 LIN9Q5TKA1 542 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 ARMCX5Q6P1M9 558 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 CYP26C1Q6V0L0 522 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 UNC13DQ70J99 1090 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 APPL2Q8NEU8 664 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 NOC3LQ8WTT2 800 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 SUSD6Q92537 303 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 C18orf25Q96B23 403 aaPredicted RBP17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 RPGRIP1Q96KN7 1286 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 C1QTNF1Q9BXJ1 281 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 HAPLN2Q9GZV7 340 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 PIDD1Q9HB75 910 aa17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 R3HCC1Q9Y3T6 440 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-201ENST00000346501 MYL1P05976 194 aa17.12■□□□□ 0.33
TSPAN4-201ENST00000346501 PFKFB1P16118 471 aa17.12■□□□□ 0.33
TSPAN4-201ENST00000346501 FGFR3P22607 806 aa17.12■□□□□ 0.33
TSPAN4-201ENST00000346501 TMEM132DQ14C87 1099 aa17.12■□□□□ 0.33
TSPAN4-201ENST00000346501 SLC39A4Q6P5W5 647 aa17.12■□□□□ 0.33
TSPAN4-201ENST00000346501 PRSS55Q6UWB4 352 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-201ENST00000346501 TMC5Q6UXY8 1006 aa17.12■□□□□ 0.33
TSPAN4-201ENST00000346501 C15orf39Q6ZRI6 1047 aa17.12■□□□□ 0.33
TSPAN4-201ENST00000346501 NT5DC4Q86YG4 428 aa17.12■□□□□ 0.33
TSPAN4-201ENST00000346501 STRA6Q9BX79 667 aa17.12■□□□□ 0.33
TSPAN4-201ENST00000346501 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
TSPAN4-201ENST00000346501 SERTAD1Q9UHV2 236 aa17.12■□□□□ 0.33
TSPAN4-201ENST00000346501 TRIP11Q15643 1979 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 A0A1B0GVL5 298 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 PRPF6O94906 941 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 RPL17P18621 184 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 LRPAP1P30533 357 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 BRCC3P46736 316 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 SPAG1Q07617 926 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 JADE1Q6IE81 842 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 DSTYKQ6XUX3 929 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 HS2ST1Q7LGA3 356 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 USP37Q86T82 979 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 C12orf76Q8N812 135 aaPredicted RBP17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 KREMEN2Q8NCW0 462 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 LNX1Q8TBB1 728 aaPredicted RBP17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 CACTINQ8WUQ7 758 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 FAM213AQ9BRX8 229 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 BLZF1Q9H2G9 400 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 KIAA1586Q9HCI6 787 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 EXOC1Q9NV70 894 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 TUBGCP4Q9UGJ1 667 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 C2CD2Q9Y426 696 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 BACE2Q9Y5Z0 518 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 UBE4BO95155 1302 aa17.11■□□□□ 0.33
TSPAN4-201ENST00000346501 CCDC195A0A1B0GUA6 201 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 A0A1W2PQ27 194 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 A0A1W2PQ64 194 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 A0A1W2PQD8 194 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 C19orf67A6NJJ6 358 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 TGM5O43548 720 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 FAM189A1O60320 539 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 ADRB2P07550 413 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 ELF1P32519 619 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 OR1D2P34982 312 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 CASP5P51878 434 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 SNRPFP62306 86 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 ZBTB41Q5SVQ8 909 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 SPATA1Q5VX52 437 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 CCDC149Q6ZUS6 474 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 GPR149Q86SP6 731 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 CMASQ8NFW8 434 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 ACSF2Q96CM8 615 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 SUSD3Q96L08 255 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 OXCT2Q9BYC2 517 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 ZDHHC7Q9NXF8 308 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 MTRRQ9UBK8 725 aa17.1■□□□□ 0.33
TSPAN4-201ENST00000346501 VCANP13611 3396 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 TISP43B9A030 160 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 I3L4J1 428 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 EXTL3O43909 919 aa17.09■□□□□ 0.33
TSPAN4-201ENST00000346501 KIF20AO95235 890 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms