RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 CAND2O75155 1236 aa16.5■□□□□ 0.23
UPF3B-202ENST00000345865 MAGOHP61326 146 aaKnown RBP16.5■□□□□ 0.23
UPF3B-202ENST00000345865 CENPCQ03188 943 aa16.5■□□□□ 0.23
UPF3B-202ENST00000345865 CAPSQ13938 189 aa16.5■□□□□ 0.23
UPF3B-202ENST00000345865 TARBP2Q15633 366 aaKnown RBP16.5■□□□□ 0.23
UPF3B-202ENST00000345865 SPDYCQ5MJ68 293 aa16.5■□□□□ 0.23
UPF3B-202ENST00000345865 PASD1Q8IV76 773 aa16.5■□□□□ 0.23
UPF3B-202ENST00000345865 EFCAB13Q8IY85 973 aa16.5■□□□□ 0.23
UPF3B-202ENST00000345865 C12orf50Q8NA57 414 aaPredicted RBP16.5■□□□□ 0.23
UPF3B-202ENST00000345865 C1orf54Q8WWF1 131 aa16.5■□□□□ 0.23
UPF3B-202ENST00000345865 SLC7A3Q8WY07 619 aa16.5■□□□□ 0.23
UPF3B-202ENST00000345865 MSTO1Q9BUK6 570 aa16.5■□□□□ 0.23
UPF3B-202ENST00000345865 AVENQ9NQS1 362 aaPredicted RBP16.5■□□□□ 0.23
UPF3B-202ENST00000345865 NUB1Q9Y5A7 615 aa16.5■□□□□ 0.23
UPF3B-202ENST00000345865 CUL2Q13617 745 aa16.5■□□□□ 0.23
UPF3B-202ENST00000345865 MON1BQ7L1V2 547 aa16.5■□□□□ 0.23
UPF3B-202ENST00000345865 LRRC19Q9H756 370 aa16.5■□□□□ 0.23
UPF3B-202ENST00000345865 NUDT17P0C025 328 aa16.49■□□□□ 0.23
UPF3B-202ENST00000345865 SLC29A2Q14542 456 aa16.49■□□□□ 0.23
UPF3B-202ENST00000345865 TMEM270Q6UE05 265 aa16.49■□□□□ 0.23
UPF3B-202ENST00000345865 ZNF677Q86XU0 584 aa16.49■□□□□ 0.23
UPF3B-202ENST00000345865 SGIP1Q9BQI5 828 aa16.49■□□□□ 0.23
UPF3B-202ENST00000345865 CHST7Q9NS84 486 aa16.49■□□□□ 0.23
UPF3B-202ENST00000345865 MTUS1Q9ULD2 1270 aa16.49■□□□□ 0.23
UPF3B-202ENST00000345865 FAM169AQ9Y6X4 670 aa16.49■□□□□ 0.23
UPF3B-202ENST00000345865 HARSP12081 509 aaKnown RBP16.48■□□□□ 0.23
UPF3B-202ENST00000345865 ABCD1P33897 745 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 TNFSF9P41273 254 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 PPP2R2AP63151 447 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 IFFO1Q0D2I5 559 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 EEPD1Q7L9B9 569 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 NLGN2Q8NFZ4 835 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 MYCBPAPQ8TBZ2 947 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 ATG4AQ8WYN0 398 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 TLCD1Q96CP7 247 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 DDX27Q96GQ7 796 aaKnown RBP16.48■□□□□ 0.23
UPF3B-202ENST00000345865 FAM81BQ96LP2 452 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 EDNRBP24530 442 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 NSFP46459 744 aaKnown RBP16.48■□□□□ 0.23
UPF3B-202ENST00000345865 FNTAP49354 379 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 NOMO3P69849 1222 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 SNX1Q13596 522 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 ODF2Q5BJF6 829 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 SLFN12LQ6IEE8 588 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 NLRP14Q86W24 1093 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 ARFGAP2Q8N6H7 521 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 ZNF473Q8WTR7 871 aaKnown RBP16.48■□□□□ 0.23
UPF3B-202ENST00000345865 ART4Q93070 314 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 CCT8L2Q96SF2 557 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 CGRRF1Q99675 332 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 C11orf70Q9BRQ4 267 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 MAF1Q9H063 256 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 PPANQ9NQ55 473 aaKnown RBP16.48■□□□□ 0.23
UPF3B-202ENST00000345865 KCNG1Q9UIX4 513 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 PCDHB4Q9Y5E5 795 aa16.48■□□□□ 0.23
UPF3B-202ENST00000345865 FAM189A1O60320 539 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 ERLIN2O94905 339 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 GJB6O95452 261 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 CST3P01034 146 aaPredicted RBP16.47■□□□□ 0.23
UPF3B-202ENST00000345865 CLTAP09496 248 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 FGFR4P22455 802 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 EIF3BP55884 814 aaKnown RBP16.47■□□□□ 0.23
UPF3B-202ENST00000345865 NOP14P78316 857 aaKnown RBP16.47■□□□□ 0.23
UPF3B-202ENST00000345865 LY6KQ17RY6 165 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 RIOX2Q8IUF8 465 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 UHMK1Q8TAS1 419 aaKnown RBP16.47■□□□□ 0.23
UPF3B-202ENST00000345865 CD2APQ9Y5K6 639 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 ADCY3O60266 1144 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 GNA15P30679 374 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 STAT5BP51692 787 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 BPIFB4P59827 614 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 SGO2Q562F6 1265 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 ABRAQ8N0Z2 381 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 PRPF31Q8WWY3 499 aaKnown RBP16.47■□□□□ 0.23
UPF3B-202ENST00000345865 RASSF4Q9H2L5 321 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 TMEM134Q9H6X4 195 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 CNTN6Q9UQ52 1028 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 R3HDM2Q9Y2K5 976 aaKnown RBP16.47■□□□□ 0.23
UPF3B-202ENST00000345865 PPP2R3BQ9Y5P8 575 aa16.47■□□□□ 0.23
UPF3B-202ENST00000345865 A0A0G2JMZ2 1700 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 E7EVH7 732 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 LDHAP00338 332 aaKnown RBP16.46■□□□□ 0.23
UPF3B-202ENST00000345865 MYBL1P10243 752 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 TCF7P36402 384 aaPredicted RBP16.46■□□□□ 0.23
UPF3B-202ENST00000345865 PTP4A2Q12974 167 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 DENND2CQ68D51 928 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 CHADLQ6NUI6 762 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 ANKS1BQ7Z6G8 1248 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 NCAPG2Q86XI2 1143 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 RBBP8NLQ8NC74 664 aaPredicted RBP16.46■□□□□ 0.23
UPF3B-202ENST00000345865 MAFO75444 373 aaPredicted RBP16.46■□□□□ 0.23
UPF3B-202ENST00000345865 PROSCO94903 275 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 ARIH2O95376 493 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 ECEL1O95672 775 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 TAS2R40P59535 323 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 MAMLD1Q13495 774 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 NCOA4Q13772 614 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 MDM1Q8TC05 714 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 SLCO2A1Q92959 643 aa16.46■□□□□ 0.23
UPF3B-202ENST00000345865 FAM107BQ9H098 131 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms