RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 MICAL2O94851 1124 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 FAM13AO94988 1023 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 MCF2P10911 925 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 PDCP20941 246 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 SCP2P22307 547 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 FGFR3P22607 806 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 NAB2Q15742 525 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 ZNF528Q3MIS6 628 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 TMEM119Q4V9L6 283 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 SEZ6Q53EL9 994 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 MYCT1Q8N699 235 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 TMEM161BQ8NDZ6 487 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 GPR152Q8TDT2 470 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 SPIRE2Q8WWL2 714 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 PPP1R10Q96QC0 940 aaKnown RBP13.57□□□□□ -0.24
SGCA-202ENST00000344627 OXCT2Q9BYC2 517 aaPredicted RBP13.57□□□□□ -0.24
SGCA-202ENST00000344627 PTPRHQ9HD43 1115 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 GDE1Q9NZC3 331 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 LARSQ9P2J5 1176 aaKnown RBP13.57□□□□□ -0.24
SGCA-202ENST00000344627 MTRRQ9UBK8 725 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 POLIQ9UNA4 740 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 NUMBLQ9Y6R0 609 aa13.57□□□□□ -0.24
SGCA-202ENST00000344627 SYN3O14994 580 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 CLDN3O15551 220 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 MAPTP10636 758 aaKnown RBP13.56□□□□□ -0.24
SGCA-202ENST00000344627 IGFBP6P24592 240 aaPredicted RBP13.56□□□□□ -0.24
SGCA-202ENST00000344627 RPL9P32969 192 aaKnown RBP13.56□□□□□ -0.24
SGCA-202ENST00000344627 OR1D2P34982 312 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 LONP1P36776 959 aaKnown RBP13.56□□□□□ -0.24
SGCA-202ENST00000344627 BRCC3P46736 316 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 MCM6Q14566 821 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 NOLC1Q14978 699 aaKnown RBP eCLIP13.56□□□□□ -0.24
SGCA-202ENST00000344627 KARSQ15046 597 aaKnown RBP13.56□□□□□ -0.24
SGCA-202ENST00000344627 UPP1Q16831 310 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 ARSHQ5FYA8 562 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 XKR4Q5GH76 650 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 AXDND1Q5T1B0 1012 aaPredicted RBP13.56□□□□□ -0.24
SGCA-202ENST00000344627 GRASPQ7Z6J2 395 aaPredicted RBP13.56□□□□□ -0.24
SGCA-202ENST00000344627 C1orf210Q8IVY1 113 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 ADSSL1Q8N142 457 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 RSAD2Q8WXG1 361 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 NTPCRQ9BSD7 190 aaKnown RBP13.56□□□□□ -0.24
SGCA-202ENST00000344627 BCO2Q9BYV7 579 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 KCND2Q9NZV8 630 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 FBXO4Q9UKT5 387 aa13.56□□□□□ -0.24
SGCA-202ENST00000344627 KANSL1LA0AUZ9 987 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 H0YCG3 227 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 H7C4K7 107 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 PODXLO00592 558 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 ZNF197O14709 1029 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 CCL16O15467 120 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 ADAM12O43184 909 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 SLC26A4O43511 780 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 ECI2O75521 394 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 TOM1L1O75674 476 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 PLCG1P19174 1290 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 TKTP29401 623 aaKnown RBP13.55□□□□□ -0.24
SGCA-202ENST00000344627 ELF1P32519 619 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 LIG4P49917 911 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 CEBPZQ03701 1054 aaKnown RBP13.55□□□□□ -0.24
SGCA-202ENST00000344627 GRIN1Q05586 938 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 CUL4AQ13619 759 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 SLC8B1Q6J4K2 584 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 ALKAL1Q6UXT8 129 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 GPR161Q8N6U8 529 aaKnown RBP13.55□□□□□ -0.24
SGCA-202ENST00000344627 LEMD2Q8NC56 503 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 PJA1Q8NG27 643 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 ZNF461Q8TAF7 563 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 FGF13Q92913 245 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 C18orf25Q96B23 403 aaPredicted RBP13.55□□□□□ -0.24
SGCA-202ENST00000344627 ZMAT2Q96NC0 199 aaKnown RBP13.55□□□□□ -0.24
SGCA-202ENST00000344627 REEP2Q9BRK0 252 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 IER2Q9BTL4 223 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 DDX23Q9BUQ8 820 aaKnown RBP13.55□□□□□ -0.24
SGCA-202ENST00000344627 DLGAP2Q9P1A6 1054 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 CA14Q9ULX7 337 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 MRPS17Q9Y2R5 130 aaKnown RBP13.55□□□□□ -0.24
SGCA-202ENST00000344627 NUB1Q9Y5A7 615 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 CLIC4Q9Y696 253 aa13.55□□□□□ -0.24
SGCA-202ENST00000344627 DOCK8Q8NF50 2099 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 ARHGEF37A1IGU5 675 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 K7ENM7 598 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 TULP1O00294 542 aaPredicted RBP13.54□□□□□ -0.24
SGCA-202ENST00000344627 TBCAO75347 108 aaKnown RBP13.54□□□□□ -0.24
SGCA-202ENST00000344627 SDHBP21912 280 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 PROZP22891 400 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 PAX3P23760 479 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 MARCKSP29966 332 aaPredicted RBP13.54□□□□□ -0.24
SGCA-202ENST00000344627 ID4P47928 161 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 ARPP19P56211 112 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 SOX4Q06945 474 aaPredicted RBP13.54□□□□□ -0.24
SGCA-202ENST00000344627 PABPC1LQ4VXU2 614 aaKnown RBP13.54□□□□□ -0.24
SGCA-202ENST00000344627 SPECC1Q5M775 1068 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 TPGS2Q68CL5 300 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 ZPBP2Q6X784 338 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 HAUS6Q7Z4H7 955 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 SLC7A14Q8TBB6 771 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 RAD54LQ92698 747 aa13.54□□□□□ -0.24
SGCA-202ENST00000344627 FAM212AQ96EL1 285 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms