RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 ZC3H12AQ5D1E8 599 aaKnown RBP15.79■□□□□ 0.12
CLCN1-201ENST00000343257 RINT1Q6NUQ1 792 aa15.79■□□□□ 0.12
CLCN1-201ENST00000343257 SPATA31D4Q6ZUB0 917 aa15.79■□□□□ 0.12
CLCN1-201ENST00000343257 ANKMY2Q8IV38 441 aa15.79■□□□□ 0.12
CLCN1-201ENST00000343257 SLC25A41Q8N5S1 370 aa15.79■□□□□ 0.12
CLCN1-201ENST00000343257 MAML1Q92585 1016 aa15.79■□□□□ 0.12
CLCN1-201ENST00000343257 CD101Q93033 1021 aa15.79■□□□□ 0.12
CLCN1-201ENST00000343257 TRAIPQ9BWF2 469 aa15.79■□□□□ 0.12
CLCN1-201ENST00000343257 USP1O94782 785 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 BMP3P12645 472 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 ZNF76P36508 570 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 NOP14P78316 857 aaKnown RBP15.78■□□□□ 0.12
CLCN1-201ENST00000343257 KIF22Q14807 665 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 SF3B3Q15393 1217 aaKnown RBP15.78■□□□□ 0.12
CLCN1-201ENST00000343257 GLIS1Q8NBF1 620 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 NDNQ99608 321 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 SH2D3AQ9BRG2 576 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.78■□□□□ 0.12
CLCN1-201ENST00000343257 LOC102724428A0A0B4J2F2 783 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 GOLGA8IPA6NC78 632 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 GOLGA8JA6NMD2 632 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 GSC2O15499 205 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 HAUS5O94927 633 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 HOXA7P31268 230 aaPredicted RBP15.78■□□□□ 0.12
CLCN1-201ENST00000343257 SIK1P57059 783 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 UBXN2AP68543 259 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 ARHGAP4P98171 946 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 ASPRV1Q53RT3 343 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 CFAP157Q5JU67 520 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 PCNX4Q63HM2 1172 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 LRRC6Q86X45 466 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 FAM81AQ8TBF8 368 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 ZFAND2BQ8WV99 257 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 CLPTM1LQ96KA5 538 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 FAM161BQ96MY7 647 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 TUBGCP5Q96RT8 1024 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 AGPAT3Q9NRZ7 376 aa15.78■□□□□ 0.12
CLCN1-201ENST00000343257 FAM86B1E9PN63 330 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 FAM86B2P0C5J1 330 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 RALAP11233 206 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 SERPINB3P29508 390 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 CCNFP41002 786 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 PPP3CAQ08209 521 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 ZNF543Q08ER8 600 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 TBC1D9BQ66K14 1250 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 FAM178BQ8IXR5 827 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 HAUS1Q96CS2 278 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 EIF2AK1Q9BQI3 630 aaKnown RBP15.77■□□□□ 0.12
CLCN1-201ENST00000343257 MAK16Q9BXY0 300 aaKnown RBP15.77■□□□□ 0.12
CLCN1-201ENST00000343257 RTFDC1Q9BY42 306 aaPredicted RBP15.77■□□□□ 0.12
CLCN1-201ENST00000343257 FRMPD4Q14CM0 1322 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.77■□□□□ 0.12
CLCN1-201ENST00000343257 KIAA1551Q9HCM1 1747 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.77■□□□□ 0.12
CLCN1-201ENST00000343257 MAGEA13PA6NCF6 341 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 ZBTB5O15062 677 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 KRT4P19013 534 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 RPA1P27694 616 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 EFTUD2Q15029 972 aaKnown RBP eCLIP15.77■□□□□ 0.12
CLCN1-201ENST00000343257 SHROOM1Q2M3G4 852 aaPredicted RBP15.77■□□□□ 0.12
CLCN1-201ENST00000343257 QRICH1Q2TAL8 776 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 CNPY1Q3B7I2 92 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 ODR4Q5SWX8 454 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 FYB2Q5VWT5 728 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.12
CLCN1-201ENST00000343257 CADPS2Q86UW7 1296 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 DHX38Q92620 1227 aaKnown RBP15.77■□□□□ 0.12
CLCN1-201ENST00000343257 IFT43Q96FT9 208 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 DCLK3Q9C098 648 aa15.77■□□□□ 0.12
CLCN1-201ENST00000343257 RREB1Q92766 1687 aa15.77■□□□□ 0.11
CLCN1-201ENST00000343257 GYS1P13807 737 aa15.77■□□□□ 0.11
CLCN1-201ENST00000343257 GCAP28676 217 aa15.77■□□□□ 0.11
CLCN1-201ENST00000343257 MAPK4P31152 587 aa15.77■□□□□ 0.11
CLCN1-201ENST00000343257 SPIRE1Q08AE8 756 aa15.77■□□□□ 0.11
CLCN1-201ENST00000343257 IKQ13123 557 aaPredicted RBP15.77■□□□□ 0.11
CLCN1-201ENST00000343257 MTMR2Q13614 643 aa15.77■□□□□ 0.11
CLCN1-201ENST00000343257 STAT4Q14765 748 aa15.77■□□□□ 0.11
CLCN1-201ENST00000343257 PDK4Q16654 411 aa15.77■□□□□ 0.11
CLCN1-201ENST00000343257 WDR72Q3MJ13 1102 aa15.77■□□□□ 0.11
CLCN1-201ENST00000343257 BTBD10Q9BSF8 475 aa15.77■□□□□ 0.11
CLCN1-201ENST00000343257 KRT82Q9NSB4 513 aa15.77■□□□□ 0.11
CLCN1-201ENST00000343257 KANSL3Q9P2N6 904 aa15.77■□□□□ 0.11
CLCN1-201ENST00000343257 LGALS13Q9UHV8 139 aa15.77■□□□□ 0.11
CLCN1-201ENST00000343257 ABLIM1O14639 778 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 LMNAP02545 664 aaKnown RBP15.76■□□□□ 0.11
CLCN1-201ENST00000343257 RTP1P59025 263 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 BFSP1Q12934 665 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 IZUMO2Q6UXV1 221 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 BRINP3Q76B58 766 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 WDR66Q8TBY9 1149 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 PSPC1Q8WXF1 523 aaKnown RBP15.76■□□□□ 0.11
CLCN1-201ENST00000343257 ZNF652Q9Y2D9 606 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 ANKRD36CQ5JPF3 1778 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 PI4K2BG5E9Z4 385 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 CCDC22O60826 627 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 ESRRAP11474 423 aaPredicted RBP15.76■□□□□ 0.11
CLCN1-201ENST00000343257 EEF2P13639 858 aaKnown RBP15.76■□□□□ 0.11
CLCN1-201ENST00000343257 CD58P19256 250 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 GSTO1P78417 241 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 TRIM74Q86UV6 250 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms