RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 KDM7AQ6ZMT4 941 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 SRLQ86TD4 932 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 FBXL13Q8NEE6 735 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 ZSWIM1Q9BR11 485 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 FAM114A2Q9NRY5 505 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 RAB20Q9NX57 234 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 RSPH14Q9UHP6 348 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 RRP15Q9Y3B9 282 aaKnown RBP16.09■□□□□ 0.17
TPM3-208ENST00000341485 TNPO2O14787 897 aaKnown RBP16.09■□□□□ 0.17
TPM3-208ENST00000341485 CYP1A2P05177 515 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 COMTP21964 271 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 GTF2H1P32780 548 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 SV2AQ7L0J3 742 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 GPD1LQ8N335 351 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 UBL4BQ8N7F7 174 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 PPTC7Q8NI37 304 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 DHX38Q92620 1227 aaKnown RBP16.09■□□□□ 0.17
TPM3-208ENST00000341485 TATDN2Q93075 761 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 ATP6V1G3Q96LB4 118 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 RPS6KC1Q96S38 1066 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 CEP89Q96ST8 783 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 ZIC5Q96T25 663 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 TMBIM4Q9HC24 238 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 GOLGA6L10A0A0M3HER8 536 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 CYP2B6P20813 491 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 ABCD1P33897 745 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 RGS2P41220 211 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 ATP1A2P50993 1020 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 CDR2Q01850 454 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 PDCLQ13371 301 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 PPP2R5EQ16537 467 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 DUSP28Q4G0W2 176 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 IQSEC1Q6DN90 963 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 TMC3Q7Z5M5 1100 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 CPNE8Q86YQ8 564 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 EXOC8Q8IYI6 725 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 OR6J1Q8NGC5 347 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 OR2W6PQ8NHA6 318 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 AFG1LQ8WV93 481 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 SOCS4Q8WXH5 440 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 DDX1Q92499 740 aaKnown RBP16.08■□□□□ 0.16
TPM3-208ENST00000341485 EMID1Q96A84 441 aaPredicted RBP16.08■□□□□ 0.16
TPM3-208ENST00000341485 FAM84AQ96KN4 292 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 TRIM31Q9BZY9 425 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 ERAP1Q9NZ08 941 aa16.08■□□□□ 0.16
TPM3-208ENST00000341485 HNRNPDLO14979 420 aaKnown RBP16.07■□□□□ 0.16
TPM3-208ENST00000341485 CA12O43570 354 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 MAFO75444 373 aaPredicted RBP16.07■□□□□ 0.16
TPM3-208ENST00000341485 LGALS2P05162 132 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 DLATP10515 647 aaKnown RBP16.07■□□□□ 0.16
TPM3-208ENST00000341485 SMPD1P17405 629 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 GARTP22102 1010 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 ARL2P36404 184 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 PEX5P50542 639 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 DR1Q01658 176 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 CLUL1Q15846 466 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 EMC10Q5UCC4 262 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 DUPD1Q68J44 220 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 DEPTORQ8TB45 409 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 ASAP3Q8TDY4 903 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 CD101Q93033 1021 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 BTBD6Q96KE9 485 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 NUP85Q9BW27 656 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 ARHGAP28Q9P2N2 729 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 FAM187AA6NFU0 413 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 LRRIQ4A6NIV6 560 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 HMGB1P1B2RPK0 211 aaPredicted RBP16.07■□□□□ 0.16
TPM3-208ENST00000341485 HBP1O60381 514 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 NR1D1P20393 614 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 NAMPTP43490 491 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 PDE6CP51160 858 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 ZNF844Q08AG5 666 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 BRDTQ58F21 947 aaPredicted RBP16.07■□□□□ 0.16
TPM3-208ENST00000341485 ZNF564Q8TBZ8 553 aaPredicted RBP16.07■□□□□ 0.16
TPM3-208ENST00000341485 ZNF653Q96CK0 615 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 BICD1Q96G01 975 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 FAM213AQ9BRX8 229 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 PI4K2AQ9BTU6 479 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 RAB17Q9H0T7 212 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 GTF3C4Q9UKN8 822 aa16.07■□□□□ 0.16
TPM3-208ENST00000341485 ALDH1A1P00352 501 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 CALCAP01258 141 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 HOXC6P09630 235 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 GLRA2P23416 452 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 CTNNA1P35221 906 aaKnown RBP16.06■□□□□ 0.16
TPM3-208ENST00000341485 TNFAIP2Q03169 654 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 MTMR3Q13615 1198 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 DHX34Q14147 1143 aaKnown RBP16.06■□□□□ 0.16
TPM3-208ENST00000341485 JAMLQ86YT9 394 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 ZDHHC14Q8IZN3 488 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 PRELID2Q8N945 189 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 UBLCP1Q8WVY7 318 aaPredicted RBP16.06■□□□□ 0.16
TPM3-208ENST00000341485 TCP11Q8WWU5 503 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 ZNF516Q92618 1163 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 APBA2Q99767 749 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 JPH2Q9BR39 696 aaPredicted RBP16.06■□□□□ 0.16
TPM3-208ENST00000341485 ERP44Q9BS26 406 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 WNT8AQ9H1J5 351 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 RABEP2Q9H5N1 569 aa16.06■□□□□ 0.16
TPM3-208ENST00000341485 FLRT1Q9NZU1 646 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms