RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 PARP2Q9UGN5 583 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 FAM170AA1A519 330 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 DCTN3O75935 186 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 RPS12P25398 132 aaKnown RBP16.32■□□□□ 0.2
LIMK2-203ENST00000340552 GALCP54803 685 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 ZNF280AP59817 542 aaPredicted RBP16.32■□□□□ 0.2
LIMK2-203ENST00000340552 STRN3Q13033 797 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 RASA3Q14644 834 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 PRELID2Q8N945 189 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 ART4Q93070 314 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 NR1H4Q96RI1 486 aaPredicted RBP16.32■□□□□ 0.2
LIMK2-203ENST00000340552 SLCO1B3Q9NPD5 702 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 PRR12Q9ULL5 1215 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 PHTF1Q9UMS5 762 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 DDX3XO00571 662 aaKnown RBP eCLIP16.32■□□□□ 0.2
LIMK2-203ENST00000340552 PSMG1O95456 288 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 ATP5DP30049 168 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 STAT2P52630 851 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 TAF1BQ53T94 588 aaPredicted RBP16.32■□□□□ 0.2
LIMK2-203ENST00000340552 ZDHHC14Q8IZN3 488 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 U2AF1L4Q8WU68 220 aaKnown RBP16.32■□□□□ 0.2
LIMK2-203ENST00000340552 TMOD4Q9NZQ9 345 aa16.32■□□□□ 0.2
LIMK2-203ENST00000340552 IGSF9BQ9UPX0 1349 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 MAP3K7O43318 606 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 ASLP04424 464 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 VCAM1P19320 739 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 WDR4P57081 412 aaKnown RBP16.31■□□□□ 0.2
LIMK2-203ENST00000340552 CDR2Q01850 454 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 ZRSR2Q15696 482 aaKnown RBP16.31■□□□□ 0.2
LIMK2-203ENST00000340552 TMEM266Q2M3C6 531 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 HS2ST1Q7LGA3 356 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 MYOCDQ8IZQ8 938 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 PPFIBP2Q8ND30 876 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 STKLD1Q8NE28 680 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 SLC35G2Q8TBE7 412 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 CALML4Q96GE6 196 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 ASCC2Q9H1I8 757 aaPredicted RBP16.31■□□□□ 0.2
LIMK2-203ENST00000340552 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.31■□□□□ 0.21e-7■■□□□ 12.9
LIMK2-203ENST00000340552 DDX43Q9NXZ2 648 aaKnown RBP16.31■□□□□ 0.2
LIMK2-203ENST00000340552 NKIRAS1Q9NYS0 192 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 TBK1Q9UHD2 729 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 DDX25Q9UHL0 483 aaKnown RBP16.31■□□□□ 0.2
LIMK2-203ENST00000340552 DIS3Q9Y2L1 958 aaKnown RBP16.31■□□□□ 0.2
LIMK2-203ENST00000340552 NUMBLQ9Y6R0 609 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 PASKQ96RG2 1323 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 LTBP3Q9NS15 1303 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 SMCHD1A6NHR9 2005 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 MEIS2O14770 477 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 TMCC1O94876 653 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 UCHL3P15374 230 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 PTGER2P43116 358 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 GMPSP49915 693 aaPredicted RBP16.31■□□□□ 0.2
LIMK2-203ENST00000340552 CDK7P50613 346 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 FXR2P51116 673 aaKnown RBP eCLIP16.31■□□□□ 0.2
LIMK2-203ENST00000340552 MAP3K10Q02779 954 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 ZYXQ15942 572 aaKnown RBP16.31■□□□□ 0.2
LIMK2-203ENST00000340552 SRRM1Q8IYB3 904 aaKnown RBP16.31■□□□□ 0.2
LIMK2-203ENST00000340552 CENPKQ9BS16 269 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 FGFBP2Q9BYJ0 223 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 ANO3Q9BYT9 981 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 METTL14Q9HCE5 456 aaKnown RBP16.31■□□□□ 0.2
LIMK2-203ENST00000340552 AAASQ9NRG9 546 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 CHMP2BQ9UQN3 213 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 TBC1D30Q9Y2I9 924 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 GJA3Q9Y6H8 435 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 WASF2Q9Y6W5 498 aa16.31■□□□□ 0.2
LIMK2-203ENST00000340552 A6NJR5 290 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 ITGA2BP08514 1039 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 CCDC166P0CW27 439 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 CETPP11597 493 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 RPL13P26373 211 aaKnown RBP16.3■□□□□ 0.2
LIMK2-203ENST00000340552 PRKCIP41743 596 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 EPS15P42566 896 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 PPATQ06203 517 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 MPP3Q13368 585 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 TNFAIP1Q13829 316 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 TRMT10CQ7L0Y3 403 aaKnown RBP16.3■□□□□ 0.2
LIMK2-203ENST00000340552 NELFCDQ8IXH7 590 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 MICALL2Q8IY33 904 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 C10orf82Q8WW14 230 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 LARP4BQ92615 738 aaKnown RBP16.3■□□□□ 0.2
LIMK2-203ENST00000340552 PNMA5Q96PV4 448 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 LARSQ9P2J5 1176 aaKnown RBP16.3■□□□□ 0.2
LIMK2-203ENST00000340552 PCYOX1Q9UHG3 505 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 AJAP1Q9UKB5 411 aaPredicted RBP16.3■□□□□ 0.2
LIMK2-203ENST00000340552 PODXLO00592 558 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 CHRNA3P32297 505 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 PRELPP51888 382 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 KCNH2Q12809 1159 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.2
LIMK2-203ENST00000340552 SAMD7Q7Z3H4 446 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 DYDC2Q96IM9 177 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 RAB34Q9BZG1 259 aa16.3■□□□□ 0.2
LIMK2-203ENST00000340552 STX18Q9P2W9 335 aaKnown RBP16.3■□□□□ 0.2
LIMK2-203ENST00000340552 ASNSP08243 561 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 ALAS1P13196 640 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 TAL1P17542 331 aaPredicted RBP16.29■□□□□ 0.2
LIMK2-203ENST00000340552 AP3B2Q13367 1082 aa16.29■□□□□ 0.2
LIMK2-203ENST00000340552 CCDC137Q6PK04 289 aaKnown RBP16.29■□□□□ 0.2
LIMK2-203ENST00000340552 NAT14Q8WUY8 206 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms