RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 ZNF507Q8TCN5 953 aa20.84■□□□□ 0.93
SYNE4-202ENST00000340477 RIN2Q8WYP3 895 aaPredicted RBP20.84■□□□□ 0.93
SYNE4-202ENST00000340477 SAAL1Q96ER3 474 aa20.84■□□□□ 0.93
SYNE4-202ENST00000340477 IKZF4Q9H2S9 585 aa20.84■□□□□ 0.93
SYNE4-202ENST00000340477 CHST7Q9NS84 486 aa20.84■□□□□ 0.93
SYNE4-202ENST00000340477 DZANK1Q9NVP4 752 aa20.84■□□□□ 0.93
SYNE4-202ENST00000340477 CGNQ9P2M7 1197 aaKnown RBP20.84■□□□□ 0.93
SYNE4-202ENST00000340477 DPP7Q9UHL4 492 aa20.84■□□□□ 0.93
SYNE4-202ENST00000340477 BARX2Q9UMQ3 279 aaPredicted RBP20.84■□□□□ 0.93
SYNE4-202ENST00000340477 EXTL3O43909 919 aa20.83■□□□□ 0.93
SYNE4-202ENST00000340477 GLP2RO95838 553 aa20.83■□□□□ 0.93
SYNE4-202ENST00000340477 LTBRP36941 435 aa20.83■□□□□ 0.93
SYNE4-202ENST00000340477 SMAD4Q13485 552 aaKnown RBP20.83■□□□□ 0.93
SYNE4-202ENST00000340477 KIAA0319Q5VV43 1072 aa20.83■□□□□ 0.93
SYNE4-202ENST00000340477 TAS1R1Q7RTX1 841 aa20.83■□□□□ 0.93
SYNE4-202ENST00000340477 NELFCDQ8IXH7 590 aa20.83■□□□□ 0.93
SYNE4-202ENST00000340477 GPD1LQ8N335 351 aa20.83■□□□□ 0.93
SYNE4-202ENST00000340477 GLIS3Q8NEA6 775 aa20.83■□□□□ 0.93
SYNE4-202ENST00000340477 KLHL5Q96PQ7 755 aa20.83■□□□□ 0.93
SYNE4-202ENST00000340477 CBWD1Q9BRT8 395 aa20.83■□□□□ 0.93
SYNE4-202ENST00000340477 RBAKQ9NYW8 714 aaPredicted RBP20.83■□□□□ 0.93
SYNE4-202ENST00000340477 TUBGCP4Q9UGJ1 667 aa20.83■□□□□ 0.93
SYNE4-202ENST00000340477 C2CD2Q9Y426 696 aa20.83■□□□□ 0.93
SYNE4-202ENST00000340477 HCFC2Q9Y5Z7 792 aa20.83■□□□□ 0.93
SYNE4-202ENST00000340477 MEFVO15553 781 aaPredicted RBP20.82■□□□□ 0.92
SYNE4-202ENST00000340477 KLRC4O43908 158 aa20.82■□□□□ 0.92
SYNE4-202ENST00000340477 EFEMP2O95967 443 aa20.82■□□□□ 0.92
SYNE4-202ENST00000340477 ADRB2P07550 413 aa20.82■□□□□ 0.92
SYNE4-202ENST00000340477 CNPP09543 421 aaKnown RBP20.82■□□□□ 0.92
SYNE4-202ENST00000340477 HOXB8P17481 243 aaPredicted RBP20.82■□□□□ 0.92
SYNE4-202ENST00000340477 MCM4P33991 863 aa20.82■□□□□ 0.92
SYNE4-202ENST00000340477 DLX2Q07687 328 aaPredicted RBP20.82■□□□□ 0.92
SYNE4-202ENST00000340477 BMT2Q1RMZ1 405 aa20.82■□□□□ 0.92
SYNE4-202ENST00000340477 JADE1Q6IE81 842 aa20.82■□□□□ 0.92
SYNE4-202ENST00000340477 TMEM184AQ6ZMB5 413 aa20.82■□□□□ 0.92
SYNE4-202ENST00000340477 NT5DC4Q86YG4 428 aa20.82■□□□□ 0.92
SYNE4-202ENST00000340477 BRSK2Q8IWQ3 736 aa20.82■□□□□ 0.92
SYNE4-202ENST00000340477 SCFD1Q8WVM8 642 aa20.82■□□□□ 0.92
SYNE4-202ENST00000340477 B3GALT6Q96L58 329 aa20.82■□□□□ 0.92
SYNE4-202ENST00000340477 PCIF1Q9H4Z3 704 aa20.82■□□□□ 0.92
SYNE4-202ENST00000340477 KIAA1586Q9HCI6 787 aa20.82■□□□□ 0.92
SYNE4-202ENST00000340477 SPTBN5Q9NRC6 3674 aaKnown RBP20.82■□□□□ 0.92
SYNE4-202ENST00000340477 KINO60870 393 aaKnown RBP20.81■□□□□ 0.92
SYNE4-202ENST00000340477 PRR29P0C7W0 189 aa20.81■□□□□ 0.92
SYNE4-202ENST00000340477 LRPAP1P30533 357 aa20.81■□□□□ 0.92
SYNE4-202ENST00000340477 PSMD5Q16401 504 aa20.81■□□□□ 0.92
SYNE4-202ENST00000340477 KNOP1Q1ED39 458 aaKnown RBP20.81■□□□□ 0.92
SYNE4-202ENST00000340477 ANKRD54Q6NXT1 300 aa20.81■□□□□ 0.92
SYNE4-202ENST00000340477 FMR1NBQ8N0W7 255 aaPredicted RBP20.81■□□□□ 0.92
SYNE4-202ENST00000340477 VN1R2Q8NFZ6 395 aa20.81■□□□□ 0.92
SYNE4-202ENST00000340477 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.81■□□□□ 0.92
SYNE4-202ENST00000340477 ADAMTS19Q8TE59 1207 aa20.81■□□□□ 0.92
SYNE4-202ENST00000340477 PIK3R5Q8WYR1 880 aa20.81■□□□□ 0.92
SYNE4-202ENST00000340477 RXFP1Q9HBX9 757 aa20.81■□□□□ 0.92
SYNE4-202ENST00000340477 AGPAT3Q9NRZ7 376 aa20.81■□□□□ 0.92
SYNE4-202ENST00000340477 RMND1Q9NWS8 449 aa20.81■□□□□ 0.92
SYNE4-202ENST00000340477 HSPBP1Q9NZL4 362 aa20.81■□□□□ 0.92
SYNE4-202ENST00000340477 CLEC1BQ9P126 229 aa20.81■□□□□ 0.92
SYNE4-202ENST00000340477 FNIP2Q9P278 1114 aa20.81■□□□□ 0.92
SYNE4-202ENST00000340477 TCF20Q9UGU0 1960 aaKnown RBP20.81■□□□□ 0.92
SYNE4-202ENST00000340477 GOLGA8IPA6NC78 632 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 ZNF233A6NK53 670 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 GOLGA8JA6NMD2 632 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 LILRB3O75022 631 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 SMC2O95347 1197 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 GLUD1P00367 558 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 NFICP08651 508 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 PAX3P23760 479 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 DPYDQ12882 1025 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 RTP2Q5QGT7 225 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 SPATA1Q5VX52 437 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 C3orf58Q8NDZ4 430 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 CACTINQ8WUQ7 758 aaKnown RBP20.8■□□□□ 0.92
SYNE4-202ENST00000340477 MSLNLQ96KJ4 702 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 VWA8A3KMH1 1905 aa20.8■□□□□ 0.92
SYNE4-202ENST00000340477 ARHGEF37A1IGU5 675 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 GRXCR2A6NFK2 248 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 SYN3O14994 580 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 TEX28O15482 410 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 RHOBTB3O94955 611 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 BMP1P13497 986 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 FGFR3P22607 806 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 BRCC3P46736 316 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 CLCN4P51793 760 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 RBM10P98175 930 aaKnown RBP20.79■□□□□ 0.92
SYNE4-202ENST00000340477 STK4Q13043 487 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 KCNC3Q14003 757 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 SURF1Q15526 300 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 ZBTB6Q15916 424 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 CES5AQ6NT32 575 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 CRELD2Q6UXH1 353 aaPredicted RBP20.79■□□□□ 0.92
SYNE4-202ENST00000340477 ANKS3Q6ZW76 656 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 SMRP1Q8NCR6 262 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 APPL2Q8NEU8 664 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 FBXL18Q96ME1 805 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 TIGD1Q96MW7 591 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 UHRF1Q96T88 793 aaPredicted RBP20.79■□□□□ 0.92
SYNE4-202ENST00000340477 R3HCC1Q9Y3T6 440 aaKnown RBP20.79■□□□□ 0.92
SYNE4-202ENST00000340477 XIRP2A4UGR9 3374 aa20.79■□□□□ 0.92
SYNE4-202ENST00000340477 PLXNA3P51805 1871 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms