RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 MCF2P10911 925 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 TPI1P60174 286 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 CCDC157Q569K6 752 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 CHSY1Q86X52 802 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 BTBD7Q9P203 1132 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 GPC5P78333 572 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 ANKRD40Q6AI12 368 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 OVOS1Q6IE37 1185 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 FMR1NBQ8N0W7 255 aaPredicted RBP13.6□□□□□ -0.23
LIN54-201ENST00000340417 EFHBQ8N7U6 833 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 SLC5A5Q92911 643 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 PARNO95453 639 aaKnown RBP13.6□□□□□ -0.23
LIN54-201ENST00000340417 CD52P31358 61 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 E2F5Q15329 346 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 SHROOM1Q2M3G4 852 aaPredicted RBP13.6□□□□□ -0.23
LIN54-201ENST00000340417 ZNF296Q8WUU4 475 aaPredicted RBP13.6□□□□□ -0.23
LIN54-201ENST00000340417 IP6K2Q9UHH9 426 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 LGALS16A8MUM7 142 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 ASMTLO95671 621 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 TUBBP07437 444 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 SLC11A2P49281 568 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 CDH18Q13634 790 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 RAPH1Q70E73 1250 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 SCFD1Q8WVM8 642 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 ATXN3LQ9H3M9 355 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.6□□□□□ -0.23
LIN54-201ENST00000340417 V9GYY5 206 aaPredicted RBP13.6□□□□□ -0.23
LIN54-201ENST00000340417 PEAK1Q9H792 1746 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 LTBP4Q8N2S1 1624 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 KLRG2A4D1S0 409 aaPredicted RBP13.6□□□□□ -0.23
LIN54-201ENST00000340417 FOXN1O15353 648 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 PEX10O60683 326 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 PLA2G6O60733 806 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 HSPA1AP0DMV8 641 aaKnown RBP13.6□□□□□ -0.23
LIN54-201ENST00000340417 HSPA1BP0DMV9 641 aaKnown RBP13.6□□□□□ -0.23
LIN54-201ENST00000340417 MYBL1P10243 752 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 HSPA6P17066 643 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 CREMQ03060 361 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 PALB2Q86YC2 1186 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 SPDYE1Q8NFV5 336 aaPredicted RBP13.6□□□□□ -0.23
LIN54-201ENST00000340417 PPTC7Q8NI37 304 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 PLCD4Q9BRC7 762 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 MTMR12Q9C0I1 747 aa13.6□□□□□ -0.23
LIN54-201ENST00000340417 CLGNO14967 610 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 ADCY6O43306 1168 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 SYN1P17600 705 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 TCP1P17987 556 aaKnown RBP13.59□□□□□ -0.23
LIN54-201ENST00000340417 MYLK4Q86YV6 388 aaPredicted RBP13.59□□□□□ -0.23
LIN54-201ENST00000340417 APOL5Q9BWW9 433 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 PHRF1Q9P1Y6 1649 aaKnown RBP13.59□□□□□ -0.23
LIN54-201ENST00000340417 CTDNEP1O95476 244 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 MMP3P08254 477 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 PPM1AP35813 382 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 C6orf163Q5TEZ5 329 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 MTHFD1LQ6UB35 978 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 ZNF784Q8NCA9 323 aaPredicted RBP13.59□□□□□ -0.23
LIN54-201ENST00000340417 UBA3Q8TBC4 463 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 MRFAP1L1Q96HT8 127 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.59□□□□□ -0.236e-8■■□□□ 13.3
LIN54-201ENST00000340417 PCDHB5Q9Y5E4 795 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 H0Y626 953 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 RBM23Q86U06 439 aaKnown RBP13.59□□□□□ -0.23
LIN54-201ENST00000340417 SLC7A14Q8TBB6 771 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 SPTLC3Q9NUV7 552 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 SLC45A1Q9Y2W3 748 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 GSTA1P08263 222 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 GSTA2P09210 222 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 RPGRIP1Q96KN7 1286 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 DPH5Q9H2P9 285 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 PARVAQ9NVD7 372 aa13.59□□□□□ -0.23
LIN54-201ENST00000340417 FMO5P49326 533 aa13.58□□□□□ -0.23
LIN54-201ENST00000340417 TAP1Q03518 808 aa13.58□□□□□ -0.23
LIN54-201ENST00000340417 ZNF467Q7Z7K2 595 aaPredicted RBP13.58□□□□□ -0.23
LIN54-201ENST00000340417 ABRAQ8N0Z2 381 aa13.58□□□□□ -0.23
LIN54-201ENST00000340417 RBM41Q96IZ5 413 aaKnown RBP13.58□□□□□ -0.23
LIN54-201ENST00000340417 PPP2R2CQ9Y2T4 447 aa13.58□□□□□ -0.23
LIN54-201ENST00000340417 PTCH2Q9Y6C5 1203 aa13.58□□□□□ -0.23
LIN54-201ENST00000340417 TJP3O95049 919 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 CXCL8P10145 99 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 NCAM1P13591 858 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 DEUP1Q05D60 604 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 ALKBH8Q96BT7 664 aaKnown RBP13.58□□□□□ -0.24
LIN54-201ENST00000340417 CERS4Q9HA82 394 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 TIMM13Q9Y5L4 95 aaPredicted RBP13.58□□□□□ -0.24
LIN54-201ENST00000340417 RWDD2BP57060 319 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 GRB10Q13322 594 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 RNF187Q5TA31 235 aaPredicted RBP13.58□□□□□ -0.24
LIN54-201ENST00000340417 CCDC170Q8IYT3 715 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 VPS52Q8N1B4 723 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 RMDN1Q96DB5 314 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 SYNCRIPO60506 623 aaKnown RBP13.58□□□□□ -0.24
LIN54-201ENST00000340417 RNASEH1O60930 286 aaKnown RBP13.58□□□□□ -0.24
LIN54-201ENST00000340417 ACO1P21399 889 aaKnown RBP13.58□□□□□ -0.24
LIN54-201ENST00000340417 FPGSQ05932 587 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 SH3BP5LQ7L8J4 393 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 SAPCD2Q86UD0 394 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 HELQQ8TDG4 1101 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 ATP6V1E2Q96A05 226 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 PCDHA13Q9Y5I0 950 aa13.58□□□□□ -0.24
LIN54-201ENST00000340417 SERPINB6P35237 376 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms