RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 DUSP6Q16828 381 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 CD300LGQ6UXG3 332 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 EP400NLQ6ZTU2 488 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 BRSK2Q8IWQ3 736 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 ELOA2Q8IYF1 753 aaPredicted RBP16.55■□□□□ 0.24
UBE3B-201ENST00000340074 TSPAN18Q96SJ8 248 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 KCTD10Q9H3F6 313 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 MRPL17Q9NRX2 175 aaKnown RBP16.55■□□□□ 0.24
UBE3B-201ENST00000340074 CHST7Q9NS84 486 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 RMND1Q9NWS8 449 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 CLDND1Q9NY35 253 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 THEGQ9P2T0 379 aa16.55■□□□□ 0.24
UBE3B-201ENST00000340074 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-201ENST00000340074 XPOTO43592 962 aaKnown RBP16.54■□□□□ 0.24
UBE3B-201ENST00000340074 NCK2O43639 380 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 LILRB3O75022 631 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 IL18RAPO95256 599 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 SMC2O95347 1197 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 CYP3A5P20815 502 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 GLUD2P49448 558 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 CYP2J2P51589 502 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 GUCY2FP51841 1108 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 DSG1Q02413 1049 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 TFF2Q03403 129 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 CTC1Q2NKJ3 1217 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 USP41Q3LFD5 358 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 FAM171A1Q5VUB5 890 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 KIAA0319Q5VV43 1072 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 SPATA1Q5VX52 437 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 KIAA1841Q6NSI8 718 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 EFCAB13Q8IY85 973 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 SMYD4Q8IYR2 804 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-201ENST00000340074 SPATA20Q8TB22 786 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 SMARCE1Q969G3 411 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 GSDMAQ96QA5 445 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 UBE2ZQ9H832 354 aaPredicted RBP16.54■□□□□ 0.24
UBE3B-201ENST00000340074 CGNQ9P2M7 1197 aaKnown RBP16.54■□□□□ 0.24
UBE3B-201ENST00000340074 COG5Q9UP83 839 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 DERAQ9Y315 318 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 C2CD2Q9Y426 696 aa16.54■□□□□ 0.24
UBE3B-201ENST00000340074 ZNF233A6NK53 670 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 I3L4J1 428 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 LRPAP1P30533 357 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 BRCC3P46736 316 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 RBM10P98175 930 aaKnown RBP16.53■□□□□ 0.24
UBE3B-201ENST00000340074 DLX2Q07687 328 aaPredicted RBP16.53■□□□□ 0.24
UBE3B-201ENST00000340074 ELAVL2Q12926 359 aaKnown RBP16.53■□□□□ 0.24
UBE3B-201ENST00000340074 ADAM15Q13444 863 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 CEP57Q86XR8 500 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 CBWD2Q8IUF1 395 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.53■□□□□ 0.24
UBE3B-201ENST00000340074 C12orf56Q8IXR9 622 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 EFHBQ8N7U6 833 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 XXYLT1Q8NBI6 393 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 RDH13Q8NBN7 331 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 BEST2Q8NFU1 509 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 GOLGA5Q8TBA6 731 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 FBXL18Q96ME1 805 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 CDCA3Q99618 268 aaPredicted RBP16.53■□□□□ 0.24
UBE3B-201ENST00000340074 KIAA1586Q9HCI6 787 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.53■□□□□ 0.24
UBE3B-201ENST00000340074 PDXKO00764 312 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 CLASP2O75122 1294 aaKnown RBP16.53■□□□□ 0.24
UBE3B-201ENST00000340074 KIF20AO95235 890 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 CNPP09543 421 aaKnown RBP16.53■□□□□ 0.24
UBE3B-201ENST00000340074 KCNA5P22460 613 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 LTBRP36941 435 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 SNRNP35Q16560 246 aaKnown RBP16.53■□□□□ 0.24
UBE3B-201ENST00000340074 RTP2Q5QGT7 225 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 ZNF658Q5TYW1 1059 aaPredicted RBP16.53■□□□□ 0.24
UBE3B-201ENST00000340074 GUF1Q8N442 669 aaKnown RBP16.53■□□□□ 0.24
UBE3B-201ENST00000340074 VN1R2Q8NFZ6 395 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 RIN2Q8WYP3 895 aaPredicted RBP16.53■□□□□ 0.24
UBE3B-201ENST00000340074 GBP4Q96PP9 640 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 PDE11AQ9HCR9 933 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 SSX2IPQ9Y2D8 614 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 NUB1Q9Y5A7 615 aa16.53■□□□□ 0.24
UBE3B-201ENST00000340074 TSC2P49815 1807 aa16.52■□□□□ 0.24
UBE3B-201ENST00000340074 TRAPPC3O43617 180 aa16.52■□□□□ 0.23
UBE3B-201ENST00000340074 TBX10O75333 385 aa16.52■□□□□ 0.23
UBE3B-201ENST00000340074 GLP2RO95838 553 aa16.52■□□□□ 0.23
UBE3B-201ENST00000340074 TFAMQ00059 246 aaKnown RBP16.52■□□□□ 0.23
UBE3B-201ENST00000340074 KCNC3Q14003 757 aa16.52■□□□□ 0.23
UBE3B-201ENST00000340074 ISM2Q6H9L7 571 aa16.52■□□□□ 0.23
UBE3B-201ENST00000340074 LLGL2Q6P1M3 1020 aa16.52■□□□□ 0.23
UBE3B-201ENST00000340074 PRSS55Q6UWB4 352 aaPredicted RBP16.52■□□□□ 0.23
UBE3B-201ENST00000340074 NT5DC4Q86YG4 428 aa16.52■□□□□ 0.23
UBE3B-201ENST00000340074 KLHL5Q96PQ7 755 aa16.52■□□□□ 0.23
UBE3B-201ENST00000340074 TTPALQ9BTX7 342 aa16.52■□□□□ 0.23
UBE3B-201ENST00000340074 EMILIN2Q9BXX0 1053 aa16.52■□□□□ 0.23
UBE3B-201ENST00000340074 LMBRD1Q9NUN5 540 aa16.52■□□□□ 0.23
UBE3B-201ENST00000340074 DPP3Q9NY33 737 aa16.52■□□□□ 0.23
UBE3B-201ENST00000340074 FSD2A1L4K1 749 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 H3BQ06 376 aaPredicted RBP16.51■□□□□ 0.23
UBE3B-201ENST00000340074 PPEF2O14830 753 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 EXOC3O60645 756 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 NR3C1P04150 777 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 FGFR3P22607 806 aa16.51■□□□□ 0.23
UBE3B-201ENST00000340074 TKTP29401 623 aaKnown RBP16.51■□□□□ 0.23
UBE3B-201ENST00000340074 MCM4P33991 863 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms